| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2104 |
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| Symbol | |
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| ID | 5539584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2702634 |
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| End bp | 2704049 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894238 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001432207 |
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| Protein GI | 156742078 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0884852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGATA CCCTCTACGA TGTGGTGGTT GTAGGTGGTG GTCCTGGCGG CTATGTGGCT
GCCATCCGCG CCGCGCAACT CGGCTTGAAA ACCGCCGTTG TCGAGCGTCA GGCGATGGGA
GGCGTCTGCC TCAATGTCGG GTGCATCCCG ACCAAGGCGC TGCTCCACAC CGCCGATCTG
CTCGAGGAAC TGCGTGAAGC GAAACGCTTC GGCGTCGTTG TCGAAGGCGT GTCGCTCGAT
TGGGAGGCGA CGCTGCGCCA GAAGGATACG GTGGTCAAGA CGATGACCAG CGGCGTTTCT
TTCCTGATGA AGAAAAATAA GGTCGATGTG ATCAATGGCT TTGCCCGTCT CGCCGGGCGC
GGGCAGGTCG CCATCAGCAC GCCTGAGGGT CAGCATCGCA CGGTGACGGC AAAGAATATC
ATCGTCGCCG TGGGCGCGCG TCCCCGTGAG ATCCCGGCAA TCGGCGCGGT GTTCGACAAT
GACCGGATTC TCTCCTCAAC CGGTGGGCTG AGTATTCCCA GCGTTCCAAA GTCGCTCCTG
GTCGTCGGCG CAGGTGCGAT TGGCGTTGAG TTCGCGTCGA TGTACCGCTC GTTCGGCGCA
GAGGTGACGC TGGTCGAAAT GCTGCCGCGC GTCGTGCCGC TCGAAGATGA GGAGGTCAGC
GCCGAACTCG CGCGCGCGCT CAACCGCCGT GGCATTAAAG TCTTCGCCGG TTCAAAACTC
AATCATCTCG AAAAGATTGA TGGCGGCGTG ATTGCGCGCC TGGTCGATGC GCAGGGCGCC
GAGCACGCGC TGACCTTCGA GCGCGCACTG GTGGGGGTCG GTATTGTGCC CAATACCGGC
GACATCGGGC TGGAAGAGGT GGGCGTCGCT CTGGATCAGC GCGGGTTCAT TAAGGTGGAT
GATTATATGC GCACGAATGT CGAAGGAATC TATGCCATCG GCGATTGCGC TGTTACGACC
CCGTGGCTGG CGCACAAGGC ATCCGCCGAG GGCATCATCG CTGCTGAAAC GATCGCCGGG
CATCATACGC AGCCGCTCGA CTACGGTAAG ATTCCGTCAT GCACCTACTG CAACCCGGAG
ATCGCCAGCG TTGGGTTGAC CGAAGCGAAA GCGCGCGAAC AGGGATACGA CGTGAAGATC
GGCAAGTTTG CGTTCACCGG CAACGGCAAG GCGACGATCC TGGGTCAGCG GCAGGGGTTT
GTCAAGATCG TCGCCGACAA ACAGTACGAT GAGGTGCTCG GCGTTCATAT GATCGGTCCG
CGCGTCACCG AACTGATCGC CGAGGGCGGG TTGGCGCTGT CGCACGAAGC GACCGCCGAG
TCGATCATGC GCACCGTCCA CGCCCATCCG ACCCTCTACG AAGCGATTGT CGAAGCGGCG
CACGCGGCGG CTGAGGGTGC AGCAATCCAT ATGTAG
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| Protein sequence | MTDTLYDVVV VGGGPGGYVA AIRAAQLGLK TAVVERQAMG GVCLNVGCIP TKALLHTADL
LEELREAKRF GVVVEGVSLD WEATLRQKDT VVKTMTSGVS FLMKKNKVDV INGFARLAGR
GQVAISTPEG QHRTVTAKNI IVAVGARPRE IPAIGAVFDN DRILSSTGGL SIPSVPKSLL
VVGAGAIGVE FASMYRSFGA EVTLVEMLPR VVPLEDEEVS AELARALNRR GIKVFAGSKL
NHLEKIDGGV IARLVDAQGA EHALTFERAL VGVGIVPNTG DIGLEEVGVA LDQRGFIKVD
DYMRTNVEGI YAIGDCAVTT PWLAHKASAE GIIAAETIAG HHTQPLDYGK IPSCTYCNPE
IASVGLTEAK AREQGYDVKI GKFAFTGNGK ATILGQRQGF VKIVADKQYD EVLGVHMIGP
RVTELIAEGG LALSHEATAE SIMRTVHAHP TLYEAIVEAA HAAAEGAAIH M
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