| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2071 |
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| Symbol | |
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| ID | 5539551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2656920 |
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| End bp | 2657639 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894206 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001432175 |
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| Protein GI | 156742046 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.420603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTC GAGGGCGGGT GGCAGTCGTC ATTGGCGCGT CGAGCGGCGT GGGATACGAA
ACAGCGCGAC GGTTGGCGCG CGAAGGGGCG CAGGTCGTGG CTGCGGCGCG TCGTCGGGAA
CGGCTTGAGA TGCTGGTGTC GGACATTGCG CGGGAGGGAG GCGAGGCGGT TGCTATTCCA
ACCGATGTTA CCGATTCGGA ACAGGTTGAT CGGTTGATTG AAAGTGCGGT GAACCTGTTT
GGGCGGGTCG ATATCCTGAT CAATTCGGCT GGCGTGACGC ACAAAATTGC GCCGCTCGAG
CAGTTTAGCA ACGATGATTT TCGTGTGGTG ATCGAGACCA ATCTGCATGG AACGTTCTAT
GCTGCGCGCG CGGTTGTTCC ACATATGAAG CAGCAGCGCT CCGGCACGAT CATCACCATT
GCATCGCGTG TCGGCAAGGT TGGTGTCGCC AATATTGCGC CGTTCTGCGC TGCGAAATTC
GCGCTCGATG GTCTCAGCCA GGCGCTTGGT GCGGAATTGC GCCCGTACAA CGTATTTGTG
ACGACCATTT TCCCCGGTCT GATCAATACG GAACTGGAAC CGCTCAACCC GCCGGAGGAG
TTTCGTCGCC GGTTGATGAC GGCGGTTGAT GTGGCGGAGG TCATTCTGTG GGTCTGTATG
CTTCCACCAA CAGTGCGCAT CGATGAATTG CCGATCATGC CGCGCCAGGT GGATATGTGA
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| Protein sequence | MRLRGRVAVV IGASSGVGYE TARRLAREGA QVVAAARRRE RLEMLVSDIA REGGEAVAIP
TDVTDSEQVD RLIESAVNLF GRVDILINSA GVTHKIAPLE QFSNDDFRVV IETNLHGTFY
AARAVVPHMK QQRSGTIITI ASRVGKVGVA NIAPFCAAKF ALDGLSQALG AELRPYNVFV
TTIFPGLINT ELEPLNPPEE FRRRLMTAVD VAEVILWVCM LPPTVRIDEL PIMPRQVDM
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