| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2060 |
|---|
| Symbol | |
|---|
| ID | 5539540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2641626 |
|---|
| End bp | 2642090 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640894196 |
|---|
| Product | FHA domain-containing protein |
|---|
| Protein accession | YP_001432165 |
|---|
| Protein GI | 156742036 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.52887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATT TTGCCAATGC CTCGATCGAC GCCGTTCTTC TTGTGCTGCG CGTAGCCGTC
GTGCTGCTGC TCTACTTCTT CCTCTGGCAG GCGCTGCGCG TCATGATCCG CGAACTCGCC
GTCATCGGGC AGACCGGTCA GGTTTCGGCG ACTCATAGCC CGTATGGTCA TCTGGTAGTG
CTGCGCAGCG GCCAGAGCGG TGTTGCGGTC GGCAAAATGT TCCCGCTCAG CCCGAGCACG
ATCATTGGAC GCAGCATGGA ACAGTGTGAG ATCGCCCTGA ATGACTCGTT TCTGTCGCAG
CAGCACGCTC GCCTCGAATT GCGCGGCAAC CAGTGGGTGC TCGAAGACCT CAACAGCACC
AATGGCACCT TCGTGAACGA CATCGAAGTG CGCGGCGCCA CCGTCGTCGA AGAAGGTGAC
ATTATTCGCG TCGGACGCAT CGAACTGCGC CTGGTAAGCG GGTAG
|
|---|
| Protein sequence | MFDFANASID AVLLVLRVAV VLLLYFFLWQ ALRVMIRELA VIGQTGQVSA THSPYGHLVV
LRSGQSGVAV GKMFPLSPST IIGRSMEQCE IALNDSFLSQ QHARLELRGN QWVLEDLNST
NGTFVNDIEV RGATVVEEGD IIRVGRIELR LVSG
|
|---|
| |