| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2050 |
|---|
| Symbol | |
|---|
| ID | 5539528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2628970 |
|---|
| End bp | 2629662 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640894184 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001432155 |
|---|
| Protein GI | 156742026 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.499036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.999033 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCC CCCGCAAGAC TGAACCTACC CGTCCTGAGT CGACCGTTTC GCGCACCTAC
CGTGCTGCTA TCCGCATCGG CGAAGATTAT GTCACCCTGG AGGAAACCAT TGTCCTGCCG
CTCGACGCCA CCGATGAAGA GGTGCAGAAG GCGGTGGATC TCGGCTGGCG CATCTACCAG
GCGCAGCGCG ACGCTATCGA GGCGCAGACG GCCAGCATCC GCGAAGCGCA ACCGGCGCCG
CAACCGCCAA CCGTGCGCGA CCCCGACGCA CCCGCGAGCG AACGGCAGCG CCATTACATC
GCCGCCCTTC AGGAAGACCT CTCCTGGACC AACGAGCAAC TGACGGCGTT TGCCCAGGAA
CATCGTGTCG ATCTGGTCAC CATGACCAAA GGTCAGGCGA GCGCATTCAT CGACAGCCTG
AAAAAACTCG CCGAGGAACG TCAGGCATAT ACCACAGCCC CGCGCAGCGC ATCCGGCGCC
GATGGCGCTG TTGCGGCGCG TCCCTCCGAC CATGCCCCTG CCAGTGAAAA GCAGATCGAT
GCGCTCAGGC GACTGGCGCT TCAGCATCAT CTCGACCTGG AAGCGGAAGT CCAGCGGCGC
TTCGAGACGA CTCCTGGCGA ATTGACCAGC GGACAGGCAT CAGCGCTGCT GCGCGAATGG
CAGCGACCTG CCCGTCGCGC TGTCGGCGAG TAG
|
|---|
| Protein sequence | MASPRKTEPT RPESTVSRTY RAAIRIGEDY VTLEETIVLP LDATDEEVQK AVDLGWRIYQ
AQRDAIEAQT ASIREAQPAP QPPTVRDPDA PASERQRHYI AALQEDLSWT NEQLTAFAQE
HRVDLVTMTK GQASAFIDSL KKLAEERQAY TTAPRSASGA DGAVAARPSD HAPASEKQID
ALRRLALQHH LDLEAEVQRR FETTPGELTS GQASALLREW QRPARRAVGE
|
|---|
| |