| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2038 |
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| Symbol | |
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| ID | 5539516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2611821 |
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| End bp | 2612438 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894173 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001432144 |
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| Protein GI | 156742015 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.304694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCAGG TCAGGATGCC AGCCGCTGAT TCGTCTGCAC TGGACGATGA GGTGTTGATT
ACCCGTGTGG CGCGTCGCGA TAGCAGCGCA CTTGAGCATC TGTATGATCG ATATGCGCGT
GTCGTGTACG CCACGGCTCT TCGCATGCTC AGAAATACCG AGATGGCGGA GGATATCGTC
CAGGAAACGT TCTGGCGCGT CTGGCGACGC AGCGCGTCAT TTGCCGTCGG TCGCGGGCAG
GTCGCCGGAT GGATTTTTGG CATCGCCCAC AATCTGTGCA TCGACGAACT CCGTCGGCAG
CGCTCACGCC CGATCACGGT GCAGAGTGAG CGCGAAGAGC AGGCAATGTT CGAGCAGCCA
GACGAGCAAA ACGATGTTGT GGGTGAGGCT ATCGCGCGAG AGCGCCGACG AATGATTCTT
TGGGCACTGG CGCAGATCCC GCCAGAGCAG CGCGAGGTGC TGGAACTGGC TTATTTTGGC
GGGCTTTCAC AGAGTGAGAT TGCCCAGCGG TTGAATAGCC CGATCGGAAC GGTTAAAACA
CGCACCAGGC TTGCATTGCA GAAGATGCGC GACTTGTTGC ACAATCAAAA CATCGGGGTG
GAAGACCTGC ACGAATGA
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| Protein sequence | MSQVRMPAAD SSALDDEVLI TRVARRDSSA LEHLYDRYAR VVYATALRML RNTEMAEDIV
QETFWRVWRR SASFAVGRGQ VAGWIFGIAH NLCIDELRRQ RSRPITVQSE REEQAMFEQP
DEQNDVVGEA IARERRRMIL WALAQIPPEQ REVLELAYFG GLSQSEIAQR LNSPIGTVKT
RTRLALQKMR DLLHNQNIGV EDLHE
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