| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2037 |
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| Symbol | |
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| ID | 5539515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2610863 |
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| End bp | 2611804 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894172 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001432143 |
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| Protein GI | 156742014 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATTGC CGAACTGCGA CGAAATGATA GACCTTATTC CTGCTTTCGT GCTGGGCGCG
CTTGATCCAG ACGAAGCCGC ACGTGTGGCA ACCCACATCG CGGCATGCCC GCGCTGTCGC
GCCGAAGCGG AGTCGTTCCG CGACACGATG GGGCTACTGC CCTATGCGGC AGGCGCCATC
GATCCGCCGC CACACGTCAA ACGTCAGTTG TTTGCGCGCA TTGCCGCAGC CAGCGAAAAC
TCTGTCACTC AACCTGTTCA GCAACCGCAG CGACGAACCG CGCGCGCGCC TCTGCCATGG
CGCTGGTTCG CGCCGGCGCT GGCATTGGTG CTGGCGCTGA TCATCGGATT GGGCGCTGTA
ACGTTCGAGG CGCGCGGACG CGCCGATCAA CTGGCAGCGG ACCTCGCAGC CAACCGTCAG
ATGCTGCGTT CGATGGAGGC GCAGATTGCC GAGGCGCGTC AGACCGCGCA GACCGTCCAG
GCGCAACTGG TTGCCAGTCA GCGTGCACTC AACGAAACGC GCGTGCAACT CGCCGCCAGT
CAGCAAGAGT TGCAGAAAAT CCAGGCGTCA ATTGGAAAGG ACGAGCAACT TGTGGCGTTC
ATTGCTGCGC CACAGACCGT CTCTCAATTG CTGGGAACCA CCGATCGCGC GCCGGAAGAG
GCAAGTGCGC GGATGTTTAT GCAGCCGGGA CATAACCGGC TCGCGTTGCT CATCTACGGG
CTGAAGTCCG CCGAACCCGG CAAGGTGTAT CGGTTGTGGC TGGCGAAGGG GAGTCAGGCG
ATTGCCATTG GCACGGTGAC AGTCGGACCG GATGGGGTCG CTGAGTTCGT CGTGGATGCC
CCAGAACCGA TGGACGCTTA TGATCAGGTG ATGATTACGC TGGACGAGAT AGATACGATT
GCGCAGCCGA GCGAAGAAGT GATCTTCGAG GCGAATCTGT AA
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| Protein sequence | MTLPNCDEMI DLIPAFVLGA LDPDEAARVA THIAACPRCR AEAESFRDTM GLLPYAAGAI
DPPPHVKRQL FARIAAASEN SVTQPVQQPQ RRTARAPLPW RWFAPALALV LALIIGLGAV
TFEARGRADQ LAADLAANRQ MLRSMEAQIA EARQTAQTVQ AQLVASQRAL NETRVQLAAS
QQELQKIQAS IGKDEQLVAF IAAPQTVSQL LGTTDRAPEE ASARMFMQPG HNRLALLIYG
LKSAEPGKVY RLWLAKGSQA IAIGTVTVGP DGVAEFVVDA PEPMDAYDQV MITLDEIDTI
AQPSEEVIFE ANL
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