| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2025 |
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| Symbol | |
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| ID | 5539503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2597924 |
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| End bp | 2598544 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894160 |
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| Product | DNA binding domain-containing protein |
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| Protein accession | YP_001432131 |
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| Protein GI | 156742002 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.870655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGACG CCAGACCAAT CGACGACGAA TGGCTGTCGC TGACAGAAGC CAGTGAATTG
CTCGGCGTGG CGGCATCGAC ACTGCGCCGT TGGGGGGATG CCGGAAAGGT GCCGATGAAG
CGCACCCTCG GCGGTCATCG TCGTTTTTCG CGGGCAGGGC TGCTGAAAGT GATGGAAGAA
GCGCAGCCGC ACGTCTCCCC CTCCACGCCG GCGCCGCTGT CGTTCCTGCG GTTCGACGCG
CACGCCATGG CGCGCGCCGA CTGGCACTCG CGCTTGATGA CGCATTCCAA TGCCGACCGT
ATGCGTGGTC TCGGGCAACG TTTGCTGGGT TTGTTGATCC AGTACATCAA CCGTCAGGAG
GAGGACGAAC GGTTTCTGAA TGAAGCGCGC GTAATCGGTA GTGGTTATGG GCGCGAAACG
CGCGATGCCG GCGTCAGTAT GCACGATACG GTGCAGGCGT TTCTGTTCTT CCGCAACTCG
TTTGCGCGAC TGGCGATGCC GGTGCCCGGC ATTACTCAAC CGAACGACCT GGATCAGGCG
GTCGCTCTCC ATGCGCGGAT CGATCGTTTC ATGGACGCAG TGCTGCTGGG AGCGATCACC
GGGTATGAGC AACAAGAGTG A
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| Protein sequence | MIDARPIDDE WLSLTEASEL LGVAASTLRR WGDAGKVPMK RTLGGHRRFS RAGLLKVMEE
AQPHVSPSTP APLSFLRFDA HAMARADWHS RLMTHSNADR MRGLGQRLLG LLIQYINRQE
EDERFLNEAR VIGSGYGRET RDAGVSMHDT VQAFLFFRNS FARLAMPVPG ITQPNDLDQA
VALHARIDRF MDAVLLGAIT GYEQQE
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