| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2019 |
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| Symbol | |
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| ID | 5539497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2589471 |
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| End bp | 2590868 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894154 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001432125 |
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| Protein GI | 156741996 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTTT CGTTGTTGAA TACGTCTCTA CCCATGCACG CCGATAGGCC CGGTCCGCGC
GCCGCAGCGT TGGTTGCCCG CGATCAGAAA GTTTTTGCAC CGTGTATGGG TCGGGTGTAC
CCGTTTGTGA TGGAGCGTGG CTCAGGATGT GACGTGTGGG ATGTCGATGG GACCCGTTAC
CTGGATTTCA ATGCCGGGAT CGCCGTCGTG TCCGCAGGGC ATACACATCC CCGTATTGTG
CGCGCTATTC AGGAACAGGC GGCCCGCTTC ATTCACATGG CAGCAACCGA TTTCTACAAC
GAGCCAATGG TGACGCTGGG CGAAAAACTG GTTGCTACCA TGCCGGTCGA ACACGAGTGG
CAGGTGTTTC TGGCGAACTC CGGCACGGAA GCGATCGAGG CGGCGATCAA ACTGGCGCGC
TACGCCACCG GTCGCCAGGG GATTATTGCC TTCTTTGGCG GATTTCACGG ACGATCCTAC
GGTGCGCTGT CGTTGACCGC TTCGAAACCG GTGCAACGGC GCGGCTACTT TCCGCTGGTT
CCCGGCACGT TTCACGCCTT CTATGCCAAT CCGTACCGCC CGCCGCTCGG TGTCGAGCCG
TCGCGCGTTG CTGAAGCGTG CCTGGCGTAC ATCGAGGATA CCCTCTTTCG CACTGTGGCG
CCGCCGCGCG ACATTGCTGC CATCGTGGTC GAGCCGATTC AGGGCGAAGG AGGCTATGTG
GTTCCGGCGC CGGGATTTCT CTGCGGGTTG CGCCGGCTGT GCGATCAGTA CGGCATTCTG
CTGATCCTCG ATGAAGTGCA GAGCGGCGTG GGGCGCACCG GAACGATGTG GGCATTCGAG
CAGGAATGCC CCTCCGATGC TTCTGGCGCA TGCACAGTAT GTGGCCGGGC ACAATTCATC
GGCTGTATCC CGGATATTCT GGTGACTGCC AAAGGATTGG GCGGCGGCGT GCCAATTGGC
GCGATTGTGG CGCGGAAAGG ATGGACCTCG CTGTGGGAGC CGGGATCGCA TGGGAATACA
TTTGGCGGGA ATGCACTGGC ATGCGTTGCG GCGAACGAAG TGCTCGATCT GGTGCGTCAC
GAACTCGCTG CGAATGCTGC GCGCGTCGGC ACATACTTGA TGCAGGGCTT GCGCAATCTC
CAGCAACGCT ACGAGGTGAT CGGCGATGTT CGCGGGCGAG GACTGATGAT CGGCGTCGAA
CTCGTTATGG ATCGAGAAAC GCGCGAGCCA GCGCGCGTGC TGGCGCAGCG CGTGATGGAC
GAATCGTTCC GTTGCGGCCT GCTGATCCTG ACCTGTGGCG CTTCGACGAT CCGCCTCTGC
CCGCCACTCG TGCTGACCGA AGCGCAGGTC GATGAGGGTT TGGCAATCTT TGAGACGGCG
TTGCGCGCCA GTCTGTAG
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| Protein sequence | MAFSLLNTSL PMHADRPGPR AAALVARDQK VFAPCMGRVY PFVMERGSGC DVWDVDGTRY
LDFNAGIAVV SAGHTHPRIV RAIQEQAARF IHMAATDFYN EPMVTLGEKL VATMPVEHEW
QVFLANSGTE AIEAAIKLAR YATGRQGIIA FFGGFHGRSY GALSLTASKP VQRRGYFPLV
PGTFHAFYAN PYRPPLGVEP SRVAEACLAY IEDTLFRTVA PPRDIAAIVV EPIQGEGGYV
VPAPGFLCGL RRLCDQYGIL LILDEVQSGV GRTGTMWAFE QECPSDASGA CTVCGRAQFI
GCIPDILVTA KGLGGGVPIG AIVARKGWTS LWEPGSHGNT FGGNALACVA ANEVLDLVRH
ELAANAARVG TYLMQGLRNL QQRYEVIGDV RGRGLMIGVE LVMDRETREP ARVLAQRVMD
ESFRCGLLIL TCGASTIRLC PPLVLTEAQV DEGLAIFETA LRASL
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