| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1964 |
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| Symbol | |
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| ID | 5539442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2514355 |
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| End bp | 2515380 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640894099 |
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| Product | C4-dicarboxylate transporter/malic acid transport protein |
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| Protein accession | YP_001432070 |
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| Protein GI | 156741941 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1275] Tellurite resistance protein and related permeases |
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| TIGRFAM ID | [TIGR00816] C4-dicarboxylate transporter/malic acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.449611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGACC AACCTTCGAT CCATGGTGCG GCAGCCGACC AGAGTCGAGC CGCAGCGCGT
CTGCGCTTGC AGTACGTTCC CATCTCGTTC TTTGCCGCAG TTCTGGGTCT GACAGGCACA
ACGATTGCAT TTCAACGCGC CGAACGATTG CTGGCGCTAC CGTTCGCCAT CAGCAGCATT
CTGCTTGTTG CGTCGCTGGC GGCTTTTCTT GCCATTGCGG TGATCTACGC GCTCAAGGCG
GCACGCTACC CCGATGCGGT CAAACGAGAG TTTGCTCATC CGATCAAGAT CAATTTCTTC
CCCACGATTT CGATCAGTCT GCTGTTGTTC GGCATCGCGT TCATGCGCCT GAATAGCGAC
ATTTCACGCG CCTTCTGGAT TGCCGGCGCC AGCGCACATC TGGTGTTCAC CATTGTGATC
CTCTCCGCCT GGATACAGCG AACCACGCTC CAGATGCAGC ATATCAACCC TGCCTGGTTT
ATTCCGATGG TCGGCAATAT GATCGTCCCG ATTGCAGGCG TCGAGCACGC TCCCATCGAG
ATTTCCTGGT TTTTCTTCAG CGTTGGGCTG ATCTTCTGGA TTGTATTGTT TACCCTTTTC
ATGGAGCGAA TGATTTTCCA TCCCCCCCTC CCCGAACGTC TGGCGCCGAC CCTGTTCATC
GTGATTGCGC CTCCAGCAAT CGGCTTCATT TCGTACCTCA GGTTGATGGA GCATGAGGTG
AGCGGCTTCG ACCTGGATGG TTTCGCCAGG ATTCTGTATT ATTTAGCGCT CTTTATCTTT
GTCGTGTTGC TCACACAGTA TCGTCAGTTT GTCAAACTCC CTTTCTACCT GTCGTGGTGG
GCGTATTCAT TCCCCATGGC AGCGATCGCA ATTGCAACGG TATTGATGGC GTCGAGCACA
AACCTGCTCT TTTTCCGGGG GCTGGCGTAT GTGCTGCTGA TTGCGCTGGG GGCGCTGATC
GCCATTCTGC TGTTCCGCAC AATTGCAGCA ATCGTTCAGC AGAAGATTTT CGTCGAGGAA
GAGTAA
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| Protein sequence | MMDQPSIHGA AADQSRAAAR LRLQYVPISF FAAVLGLTGT TIAFQRAERL LALPFAISSI
LLVASLAAFL AIAVIYALKA ARYPDAVKRE FAHPIKINFF PTISISLLLF GIAFMRLNSD
ISRAFWIAGA SAHLVFTIVI LSAWIQRTTL QMQHINPAWF IPMVGNMIVP IAGVEHAPIE
ISWFFFSVGL IFWIVLFTLF MERMIFHPPL PERLAPTLFI VIAPPAIGFI SYLRLMEHEV
SGFDLDGFAR ILYYLALFIF VVLLTQYRQF VKLPFYLSWW AYSFPMAAIA IATVLMASST
NLLFFRGLAY VLLIALGALI AILLFRTIAA IVQQKIFVEE E
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