Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1934 |
Symbol | |
ID | 5539412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2475938 |
End bp | 2478013 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894070 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_001432041 |
Protein GI | 156741912 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.230248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000161131 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAAGCC ATGCGCATAT GTACGATATT CTCTTTGAGC CGGTGCGGAT TGGACCGGTG ACCGCGCCAA ATCGTTTTTA CCAGGTTCCG CATTGCAACG GCATGGGGTA CCGCATGCCG CGCGCGCTGG CTGAAATGCG CCGCGTCAAA GCCGAAGGCG GCTGGGGCGT TGTCTGCACA GAAGAAGTCG AGATCCATCA TTCCAGTGAT CTGGCGCCGT TCTTCGAGGG GCGGCTGTGG AGCGACGATG ACATTCCGGC GCTGGCGCTG ATGGCGGAAG CCGTGCATCG TCACGGCGCG CTGGCGGGGA TCGAACTGAC CCACAATGGC CACGATGCGC TTAACTATTA CTCCCGCGCC ACATCGTTCG GTCCACGCTC GATGGGCTTG ATGGGGGGCA CAGGCTTCGA GCCGGGGCAG TGCCGCCGGA TGGACCGCGA GGATATTCGG AATCTGCGCC GCTGGCACCG GAATGCCGCA CTGCGCGCGA AACGCGCCGG CTTCGACATT ATCTACTGTT ACGCCGGGCA TGGCTTGAGC CTGGCGATGC ACTTCCTGCT GCGCCGCTTC AACGACCGCA CCGACGAGTA TGGCGGCAGC CTGACCAACC GTGTACGCCT TTTCCGCGAT TTAATCGAGG ACACAAAGGA CGCCGTCGGC GACCGCTGCG CAGTGGCGGT GCGGATGGCG GTTGATGAAC TGCTCGGTGA TGAAGGTCTC AGCAGTCAGG GGGAGGCGTA TGAGATCGTT GCCATGCTCG CGGAACTCCC CGATCTGTGG GATGTCAATA TCTCTGCGTG GAGCAACGAC TCGGCGTCGT CGCGCTTTGA GAAGGAAGGG TTCCAGGAGC CGTACATTGC CTTCGTCAAA CAATTGACGA GCAAACCGGT GGTTGGCGTG GGACGCTACA CCTCGCCGGA GGCGATGGTG TCGGCGGTGC GGCGCGGCAT TCTCGACTTC ATCGGCGCAG CGCGTCCGTC GATTGCCGAT CCCTTCCTGC CGCGCAAAAT CCAGGAAGGA CGCACCGAAG ATATTCGCGA GTGCATCGGA TGCAATATTT GCGTCTCCGG CGACAATAAG TGTGTGCCGA TCCGCTGCAC CCAGAATCCA ACAATGGGCG AGGAATGGCG GCGCGGGTGG CATCCTGAAA CGATTGCTCC AAAGTGCAGC GATGCAGAAG TCCTGGTCAT CGGGGCGGGT CCTGCCGGAC TGGAGTGCGC CAGGGCGCTC GGTCAGCGCG GCTATCAGGT GGCGCTGGTC GAGGCGCGGC GTGAACCGGG CGGGCGGGTG GCGCGTGAGG CGCGCCTTCC CGGTTTGAGC GAATGGCGGC GTGTGATCGA CTGGCGCTTG ACGCAGATCG CCCGTATGCC GAACGTGCAA TTGCTGCCGG GAAATCCGAT GACCGCCGCC GATGTGTTGG AAAGCGGGTA TGAGCACGTG ATCATCGCAA CCGGTGCGAT CTGGCGGCGC GATGGCGTGG GACGCACGGT GTACCATCCC GTTCCCGGCT GCGATCTGTT GCACGTCTAT ACACCCGATG ACATTATGGA CGGACGCCTG CCGACAGGTC GCGTGGTAAT CTACGATGAC GATCACTATT ACATGGGCGG CGTGCTGGCG GAATTGCTCG CGTGTCGGGG GTGTGGCGTC ACGCTCTGCA CGCCGGCGCC GCTGGTGTCG CACTGGTCGC AGTTCACACT GGAACAGGAA CGCATCGAGC GTCGGTTGCG CGACCTTGGT GTTGCCATCC ATACGCGCAG CGCCCTCAGC GCCGTTCACG TTGGCGCCGT CACGGTACGT GACATTGCCG CGAGTCGTCT GACCGATCTG GCATGTGATT CGGTGGTGAT GGTCGCCGAT CGCGCGCCGC GCGACGCACT GGCGACCGAC CTGGCGCCGG CGCGAGCCGA CGGTCGTCTC CGTACTCTGC GGCTCATCGG CGATGCCAAC GCGCCGCACA TCATCGCGCA GGCGGTGTTT GCCGGGCACC TGGCGGCGCG CGAGTTCGAT GAGATGCCGG ATGCCGATGT GCCGCCGTTT GCACGAGAGT TTATTCCGTT GAACGTTCAA TCTTGA
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Protein sequence | MTSHAHMYDI LFEPVRIGPV TAPNRFYQVP HCNGMGYRMP RALAEMRRVK AEGGWGVVCT EEVEIHHSSD LAPFFEGRLW SDDDIPALAL MAEAVHRHGA LAGIELTHNG HDALNYYSRA TSFGPRSMGL MGGTGFEPGQ CRRMDREDIR NLRRWHRNAA LRAKRAGFDI IYCYAGHGLS LAMHFLLRRF NDRTDEYGGS LTNRVRLFRD LIEDTKDAVG DRCAVAVRMA VDELLGDEGL SSQGEAYEIV AMLAELPDLW DVNISAWSND SASSRFEKEG FQEPYIAFVK QLTSKPVVGV GRYTSPEAMV SAVRRGILDF IGAARPSIAD PFLPRKIQEG RTEDIRECIG CNICVSGDNK CVPIRCTQNP TMGEEWRRGW HPETIAPKCS DAEVLVIGAG PAGLECARAL GQRGYQVALV EARREPGGRV AREARLPGLS EWRRVIDWRL TQIARMPNVQ LLPGNPMTAA DVLESGYEHV IIATGAIWRR DGVGRTVYHP VPGCDLLHVY TPDDIMDGRL PTGRVVIYDD DHYYMGGVLA ELLACRGCGV TLCTPAPLVS HWSQFTLEQE RIERRLRDLG VAIHTRSALS AVHVGAVTVR DIAASRLTDL ACDSVVMVAD RAPRDALATD LAPARADGRL RTLRLIGDAN APHIIAQAVF AGHLAAREFD EMPDADVPPF AREFIPLNVQ S
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