| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1884 |
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| Symbol | |
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| ID | 5539362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2418834 |
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| End bp | 2420240 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894021 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001431992 |
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| Protein GI | 156741863 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0104687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAA AGATTGTCTT CATCGGCGCC GGCAGCACGG TGTTCGCCAA AAACTTGATG
GGCGACATCC TGAGCTTCCC CGAACTTGCC AACGCCACGC TGACGTTGTT CGACATTGAC
CCGGAGCGCT TGCGTACATC CGAAGTCGTG GCGCACAAGG TCGCTGCGGC GCTCGACGCG
CGCCCGACGA TTGAGGCGAC GACCGACCGA CGCCGCGCGC TCGATGGCGC CGATTATGCC
ATTTGCATGA TCCAGGTCGG CGGTTATAAG CCGTGTACGG TGACCGATTT CGAGATCCCG
AAGAAGTATG GTCTGCGCCA GACGATTGCC GATACCCTGG GCATCGGCGG GATTATGCGC
GGGTTGCGCA CCATTCCAGT GTTGCTCTCG ATATGCCGCG ATATGGAAGA GGTGTGTCCC
GATGTGACGT TCTTGCAGTA TGTCAATCCA ATGGCCATGA ATTGCTGGGC GATCAGTCGC
GCCAGCACGA TTAAGACGGT CGGGTTGTGC CACAGTGTGC AGGGCACTGC CGAGCAACTG
GCGCACGACA TTGGCGTGCC GGTAGAGGAG ATCAACTATG TCTGCGCTGG CATCAACCAT
ATGGCGTTCT ACCTGCGCTT CGAGCGAAAC GGCGAAGACC TCTATCCGCT CATCCGCAAG
GTCTACGACG AAGGGCGCGT GCCGGCGTGG AATCGGGTGC GCTACGAAGT GTTCCGACGC
CTTGGCTATT TTGTGACCGA GTCGAGCGAG CACTTCAGTG AATACGTGCC CTGGTTCATC
AAGCGCGACC GACCCGATCT GATCGAGCGC TTTAATATTC CGCTCGATGA ATACATCCGC
CGTTGCGAAG TGCAACTGGC GGGCTGGGAG TTCGTGCAGT ACAAACTCGA TCATCCAGAG
ATTGCGAGTT CCGATCTGCG CGCTGCGATG CGCGAACGTT CCCGCACCAA TCCGTACCTG
ACGGGCGAGT TCATCGACTA TGTCATCACA TCTGCCGAAG ACCTCGAGGC AGGGAAGGTC
GAGCGCAGCC ACGAGTATGG CTCGCTGATC ATCCACAGCC TGGAAACGGG GCAACCGCGC
GTGGTCTACG GAAATGTGCC TAACTATGGG CTGATCGATA ATCTCCCACA GGGGTGCTGC
GTCGAAGTTC CGTGTCTGGT GGACAAAAAC GGCGTTCAGC CGACAAAGAT CGGCGCACTG
CCGCCGCACC TCGCTGCGCT CATGCAAACG AACATCAACG TGCAGGCGTT GACCGTCGAA
GCGGCGCTGA CCGGCAAACG CGAGCATATC TACCACGCGG CGATGCTCGA TCCGCACACT
GCCGCTGAAC TCGATCTGGA TCAGATCTGG GCATTGGTGG ATGACTTGAT CGCCGCCCAC
GGCGACTGGT TGCCGGAGTA TCGGTAG
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| Protein sequence | MPPKIVFIGA GSTVFAKNLM GDILSFPELA NATLTLFDID PERLRTSEVV AHKVAAALDA
RPTIEATTDR RRALDGADYA ICMIQVGGYK PCTVTDFEIP KKYGLRQTIA DTLGIGGIMR
GLRTIPVLLS ICRDMEEVCP DVTFLQYVNP MAMNCWAISR ASTIKTVGLC HSVQGTAEQL
AHDIGVPVEE INYVCAGINH MAFYLRFERN GEDLYPLIRK VYDEGRVPAW NRVRYEVFRR
LGYFVTESSE HFSEYVPWFI KRDRPDLIER FNIPLDEYIR RCEVQLAGWE FVQYKLDHPE
IASSDLRAAM RERSRTNPYL TGEFIDYVIT SAEDLEAGKV ERSHEYGSLI IHSLETGQPR
VVYGNVPNYG LIDNLPQGCC VEVPCLVDKN GVQPTKIGAL PPHLAALMQT NINVQALTVE
AALTGKREHI YHAAMLDPHT AAELDLDQIW ALVDDLIAAH GDWLPEYR
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