| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1784 |
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| Symbol | |
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| ID | 5539262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2289415 |
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| End bp | 2291187 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640893923 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001431894 |
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| Protein GI | 156741765 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.682843 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACA GTGTGGATCG ACCCTGGTTT GCGAGTTATG AGCCGAATGT GCCGCGTTCT
GTCGAAATCC CCAACGTCAC GCTGAACTAC TTTTTGGCGG AGAGTACGCG AAAGTACCCG
TACAACACAG CGACCAATTT TGTGTTGAGC TACCTGGCGC GCGGTCTGTA CACCGTCGGT
GGCAAGATGA CCTACCAGAA GCTCAACGAA ATGGTCGATC GCTTTGCCAA TGCGCTCTAT
CAACTGGGGG TGCGCAAGGG CGATCGCGTC GCGTTGATGC TGCCCAATTC GCCACACTAT
GTGATTGCGT TCTTTGCGTC AATGCGCATT GGCGCGATTG TCGTCAATAA CAATCCAACG
TACACTGCGC GTGAACTGAA GCATCAACTG GTCGATAGCG GCTCTGAGAC GATTGTGCTG
CTGAACCTGT TCTATCCGCG GTTGCAGGAA ATCCGTGCTG AAACGCCGCT CAAGCGCGTG
ATTGTGGCGC ATATCTACGA TACGCTTGGT CCGCTGTCGC GCTTCCTGGT GCATGCCAAA
CAGAGCAAAC AGCCCGATTG GGTCGATGTC TCGCACGACT CGAGCGTCTA TCTGTTCCAG
CATTTGCTCG AACGCTATGG ACCCAATCCG CCAACGGTCG ATGTGCAACC CGAGGACGTT
GCGCTGTTCC AGTATACCGG CGGGACGACC GGTTTGCCGA AGGCGGCGAT GCTCACCCAT
CGCAATCTGG TGGCAAATAC CGTCCAGGTG GCGTCGTGGC TCACAAAGAC CGACTATGGC
GCCGAGAAGA TGATGTGCGC TATTCCGTTC TTCCATGTCT ATGGCATGAC GGTCGCAATG
ATCTACGGTC TTTACCTGGG TGGCGAGTTG ACGATTGTTC CCAACCCGCG CGAACTCGAT
CATGTGATGG ATGTGATGCA GCGCGAGCGT TCGACCCTCT TCCCCGGTGT GCCGGCGATG
TATATTCGGA TTGTCAACCA TCCGCGCATC AATGAGTATG ATTTGAAGTC GATCAAAGCC
TGTATCAGCG GTTCGGCGCC GCTGCCCATC GAAGTCCAGG AGAAGTTCGG TCAGATCACC
GGCGGACGCC TGGTTGAAGG CTTCGGGATG ACGGAACTCT CGCCGGTCTC GCACTGCAAC
CCGGTGTTCG GTAAACGGAA GAAGGGATCG ATTGGCATTC CGCTGCCGGA TGTCGATGCG
AAGATCATCG ATCTGGAAAC GGGTGAGGAT ATTCCGTTCG GGTCGGACAA GGAAGGCGAA
CTGGTCGTCA AGGGTCCGAT GGTGATGAAG GGGTACTGGA ATCGTCCCGA GGAGACCGAA
GCGACGTTCA CTCCCGATGG TTGGCTGCGC ACCGGGGATA TTTGCAAGGT CGATGAAGAG
GGATACTTCT ACATCGTGGA CCGCAAGAAG GATATGATGA TCGCGTCGGG GTACAAGGTG
TTGCCGCGCG ATGTCGAGGA AGTGCTCTTC ACCCATCCCA AGGTGCTCGA AGCCGTGGTT
GTCGGCATTC CGCATCCAAC GCGCGGTGAT GACACGATTA AGGCGTTCAT CGTGCTCAAA
CCAGGTGAGA GTGCAACGCC CGACGAAATT CGTGAGTTCT GCAAGCAGCA CCTCGCGCCG
TATAAGGTGC CGCGTGAGGT CGAGTTCCGC GCCGAACTGC CCAAGACGAT GGTCGGCAAA
GTGTTGCGGC GCGTGTTGAT CGAAGAAGAA AAGGCAAAAC TCGCGGGCGC GCCAGCGATG
GAAACCGCAG GTGCGTCGTC TGCCAGAGGA TAA
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| Protein sequence | MNNSVDRPWF ASYEPNVPRS VEIPNVTLNY FLAESTRKYP YNTATNFVLS YLARGLYTVG
GKMTYQKLNE MVDRFANALY QLGVRKGDRV ALMLPNSPHY VIAFFASMRI GAIVVNNNPT
YTARELKHQL VDSGSETIVL LNLFYPRLQE IRAETPLKRV IVAHIYDTLG PLSRFLVHAK
QSKQPDWVDV SHDSSVYLFQ HLLERYGPNP PTVDVQPEDV ALFQYTGGTT GLPKAAMLTH
RNLVANTVQV ASWLTKTDYG AEKMMCAIPF FHVYGMTVAM IYGLYLGGEL TIVPNPRELD
HVMDVMQRER STLFPGVPAM YIRIVNHPRI NEYDLKSIKA CISGSAPLPI EVQEKFGQIT
GGRLVEGFGM TELSPVSHCN PVFGKRKKGS IGIPLPDVDA KIIDLETGED IPFGSDKEGE
LVVKGPMVMK GYWNRPEETE ATFTPDGWLR TGDICKVDEE GYFYIVDRKK DMMIASGYKV
LPRDVEEVLF THPKVLEAVV VGIPHPTRGD DTIKAFIVLK PGESATPDEI REFCKQHLAP
YKVPREVEFR AELPKTMVGK VLRRVLIEEE KAKLAGAPAM ETAGASSARG
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