| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1768 |
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| Symbol | |
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| ID | 5539246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2271894 |
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| End bp | 2274272 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893907 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001431878 |
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| Protein GI | 156741749 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGC TGACTGCGGT TCTTTCAGGA TTTGGCGGCG CCATTGCGGC GCCGTGGCTG
CACCGGGTTG CGCCGCGCTC TGCCGGATGG ATTATGGCGC TGCTGCCGTT TGCGTTGATG
ATCTACTTCA TCAGCCTGGT TCCGACAGTG GCAGGCGGAG AGACGTTGCG TTTCAGTTAT
GCATGGGTTC CGAGCCTGGG GATTAATCTG TCGTTTCGTA TCGACGGGTT GAGTCTGCTT
TTTGCGCTGC TGATTACCGG CATCGGCACG CTGGTGATGA TCTATGCCGG CGGCTATCTG
GCGAATGATC CGATGCTGGG ACGGATGCTA ACGCTGCTGC TGATCTTTAT GGCGGCCATG
CTCGGCATCG TCACGTCCGA CAATCTGATC GGTCTGTTCG TCTTCTGGGA ACTGACGACG
ATCAGTTCCT ATCTGTTGAT TGGTTACAAG CACGAGTACG AGAAAGCGCG CAAGGCGGCG
TTGCAAAGCC TGCTGGTGAC CGGCATTGGC GGGCTGGCGC TGCTGGCGGG GTTTGTGCTG
CTGGGGCAGG TCGCCGGGAC GCTGGAGATC AGCGATTTGC TGACGCAGGG CGCTGCGGTG
CGCGCGCACC CATTGTACGG CGGCATCCTG GCGCTGGTTT TGTTCGGCGC ATTCACCAAA
TCGGCGCAGT TCCCGTTCCA CTTCTGGCTT CCCGGCGCGA TGGAAGCGCC GACGCCGGTC
AGTTCGTATC TCCACTCGGC GACGATGGTA AAGGCCGGCG TCTTTCTGCT GGCGCGGCTC
AACCCGGTGC TCGGCGGCAC GGAAGCCTGG CAATGGTTGC TCACCGGCTT CGGGAGCGCC
ACCATGATCG TCGGTGCGTT GCTGGCAGTG CAGCAGACCG ATCTGAAGCG TATTCTGGCG
TACACCACCG TTTCGGCGCT GGGCACGCTG GTGGCGCTCA TTGGCGTCGG CACGGACGAT
GCGCTCAAGG CGGCGATGGT CTTTACGCTG AGCCATGCGC TGTACAAAGG CGCGTTGTTC
CAGGTTGCCG GGTCGGTCGA TCACGAGACC GGCACGCGCG ACATCACGAA CCTTGGTGGG
TTGCGCGCTG TGATGCCGAT CACGGCGGCA GCCGGCATGC TGGCTGCGGT TTCGATGGCC
GGTTTGCCGC CGTTGTTTGG GTTCATTGCC AAGGAAGTTC AGTACAAGGC AAACCTGGAA
GAGCCGATCC TGATTACGGT CGCGCTCTTG ACGAATATGC TGACCGTTGT CGCCGCCGGT
TTGGTATCGT TGCGCGTGTT CTTTGGTCCA CCGACGCAGA CGCCGAAGCA CGCGCACGAA
GCGCCGTTGA GTATGCGGAT GGGTCCGGTC GCGCTGGCGC TCGCGGGGCT TGGCACGGGA
TTGTTCTCGG TTCAGATCGG CAATGCCCTG ATTGGACCTG CAACCGGTTC GGTGATCGGG
AAGACAAAGG AGATCGAACT GCTCCTGTGG GCCGGTATTG AAGGCGCAGC CGGTCAGGCG
CTGGTGTTGA GCGTGGTCAC CCTGGTTGTT GGTGCAGGGT TGTATCGGGC GCGGGGTATC
TTCGCGCGCT TTGCCGCCGC TACTGCGCCG CTGGCGTCAT GGGGCGCCGA AGGATGGTAT
CAGCGCGCCG TCGATGGCAT GCTCGCGCTG GCAGCCTGGC AGACCCGGTT GCTGCAAAAT
GGCTATCTGC GGTTTTATAT CGGACTGATC ATCGCCACGG TGCTGGCGCT GACTACATTC
ACGCTCGTGG TTGGGCGGGT CGTGATTACT ATTCCGGCGG ATTGGGCTGA TGTGCGTGTG
TATGAACTGA TGGTGGCGCT GATCATCATT GCTGCCACAA CGTTCGTCAT CCGTGCGACG
TCGCGCATGG CCGCCGTTGT TGGTCTGGGA TTCGTCGGCT ATGGCACGGC ACTGGTTTTC
CTGCTGTTCA GCGGACCCGA TCTGGCAATC ACGCAGTTTG CCGTCGAGAC GCTGGTAGCC
ATCCTGTTTG TGCTGGTCGT CTATCGTTTG CCGCGCTTCA GCAATCTTTC AACCGCAGGC
GCGCGAGTGC GTTCCGCAGG GCTTGCGATT GCCGGCGGCG CGCTGATGAC CGTGCTGACC
CTGATGGCGC TCGCATCACC GACCGAGTCG CGTGTGAGCG GATTTCTGGC AGAGAATAGT
GTGCCACAGG CATTTGGTCG GAATGTGGTC AATGTCATTC TGGTCGATTT TCGTGGGTTC
GATACAATGG GCGAAATTAC GGTGCTCGGC GCGGCAGCCA TTGGAATCTA CGCCCTGCTC
AGGCTTGTGC CGGCGTCTGA GCATGATGAG CAGAAGGGCG CTGATGCGCA GACGGGCAAT
GGCGTTCCGC GTGAGCGCAC CGAGACGATC GATGTCTGA
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| Protein sequence | MPMLTAVLSG FGGAIAAPWL HRVAPRSAGW IMALLPFALM IYFISLVPTV AGGETLRFSY
AWVPSLGINL SFRIDGLSLL FALLITGIGT LVMIYAGGYL ANDPMLGRML TLLLIFMAAM
LGIVTSDNLI GLFVFWELTT ISSYLLIGYK HEYEKARKAA LQSLLVTGIG GLALLAGFVL
LGQVAGTLEI SDLLTQGAAV RAHPLYGGIL ALVLFGAFTK SAQFPFHFWL PGAMEAPTPV
SSYLHSATMV KAGVFLLARL NPVLGGTEAW QWLLTGFGSA TMIVGALLAV QQTDLKRILA
YTTVSALGTL VALIGVGTDD ALKAAMVFTL SHALYKGALF QVAGSVDHET GTRDITNLGG
LRAVMPITAA AGMLAAVSMA GLPPLFGFIA KEVQYKANLE EPILITVALL TNMLTVVAAG
LVSLRVFFGP PTQTPKHAHE APLSMRMGPV ALALAGLGTG LFSVQIGNAL IGPATGSVIG
KTKEIELLLW AGIEGAAGQA LVLSVVTLVV GAGLYRARGI FARFAAATAP LASWGAEGWY
QRAVDGMLAL AAWQTRLLQN GYLRFYIGLI IATVLALTTF TLVVGRVVIT IPADWADVRV
YELMVALIII AATTFVIRAT SRMAAVVGLG FVGYGTALVF LLFSGPDLAI TQFAVETLVA
ILFVLVVYRL PRFSNLSTAG ARVRSAGLAI AGGALMTVLT LMALASPTES RVSGFLAENS
VPQAFGRNVV NVILVDFRGF DTMGEITVLG AAAIGIYALL RLVPASEHDE QKGADAQTGN
GVPRERTETI DV
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