Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1712 |
Symbol | |
ID | 5539190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2210469 |
End bp | 2211554 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893851 |
Product | hypothetical protein |
Protein accession | YP_001431822 |
Protein GI | 156741693 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC GACTGAACCG GCGTATCTGG CGGCACGAAG GCGGCGCGGA AGCAGTGGAG ATCATCGCAT TGATCGCCGT ATGCATCGCG CTGCTGGCTG CCATCGGACT GGGGTTCAAC GCACGCGGCA GTGATCTGGG CGCAGCCGCA GTTGGAACGT TGACCCGGTT TGCCTCCGAA CAATCGCTGA ATATCGGGAA TGTCGCTATC GATGGTCCTG ACGTGCAGGG TCCTGGCATC TCGCCGATCA CTGCCCCCGC CGTTGGCATT CCTCGGATTG TCGTCCAGCC GCCGCGTATA TCGGCTCCGG TTCAACCGCA ACAATCCGCG TATCAACCGG TCCAGCAGGC GCCTGCGCAA CAGGGATCCG GCAATCCGTT GCTGGACTTC TGGAACAGTC TGACAGGCTG GGTGCAGGGC GCCATCCTTG GTCTGGCCGG CGCAGCCGTA GCGGTCGTAG CATTCCTTGG GCTGGTGGCA GCAGGGGTGA TTACGGTCGC CTCGGGGGTG GTCCTGGCGG CTATTGCTGC TGTTGCGCTG GCGGTTGGCG CAATTGCAGG CGCAATCTAC GTGGTGGCGA CCGGTAGGGT CGATGCCTGG CAGATCGTGT TGCTGGGGTT CGGTGCTGCC AGCGCGGTGC TGATTCCGAT AGGATTGGCG CTGCGGTTCC CGGCGGTTGC AGCGTTTTTC AGCAGCATTC CTGCGCGTAT TGCAGCGCTG TGGAGCCAGC GGATCGCACC GTGGGTGAGG GGTGTGATTT CGAATTTTTG GAAATGGCTG CACGACCGTG AAGCGGTTGG AGCGTGGTTA AAGAAATACG GTTTGCCACT GGCTCTGTGC TCGCGTGCAC TCGAGGAATT TGTCAAAGGC TCGTATGTCG AAGGATTCCT GATTATGCTC ATCATTACAC TCGTCGAGAC GTTCGCAAAG GGAAATCCGG CGGCATATCT GGTGACCTTT CTAATCTATC CTATTTTGAA GGGAATATAC GGTCGCTACA AAGCTCGACT TTATCCATCT GTGCCGCTCA CGCAGCATAG GCGAGCGCAT CAGTCAGGCG AACAAGTAAC GACTTCGGGA TTTTGA
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Protein sequence | MNARLNRRIW RHEGGAEAVE IIALIAVCIA LLAAIGLGFN ARGSDLGAAA VGTLTRFASE QSLNIGNVAI DGPDVQGPGI SPITAPAVGI PRIVVQPPRI SAPVQPQQSA YQPVQQAPAQ QGSGNPLLDF WNSLTGWVQG AILGLAGAAV AVVAFLGLVA AGVITVASGV VLAAIAAVAL AVGAIAGAIY VVATGRVDAW QIVLLGFGAA SAVLIPIGLA LRFPAVAAFF SSIPARIAAL WSQRIAPWVR GVISNFWKWL HDREAVGAWL KKYGLPLALC SRALEEFVKG SYVEGFLIML IITLVETFAK GNPAAYLVTF LIYPILKGIY GRYKARLYPS VPLTQHRRAH QSGEQVTTSG F
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