Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1699 |
Symbol | |
ID | 5539177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2193230 |
End bp | 2194072 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893838 |
Product | dTDP-4-dehydrorhamnose reductase |
Protein accession | YP_001431809 |
Protein GI | 156741680 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0285308 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATTG CAGTGACCGG CGCCGGTGGC CAATTGGGGA AGGCATTGCA GCGCGTTCTG TCAGACGCGC ACGAGATTAT TCCATTGAAT CACGCCGATC TGGACCTGGA ACGGTCTGAT TGTGTGCAGG CGCTGGTTGC CACGGACGCG CAATGTGTCA TTCATCCGGC GGCGTACACG CATGTCGATG GATGCGCTCG TGATCCTGAT CGCGCCTATC GCGTCAATGC GTTGGGTACG CGCTACGTGG CACTGGCGTG CCAGGCGCTC GACGCGCCGC TGGTGTATGT CAGTACCAAT GAGGTCTTCG ATGGCACGGC GACATCGCCG TACCTCGAGT ATGACCGCCC TGCGCCGATC AATCCCTATG GCTTCTCGAA GTGGGCGGGC GAACAGGTGG TGCGCGAACT GCTGCGCCGA TTTTACATCG TGCGAGTGGC ATGGTTATTC GGTGGTGAGC GCAACTTCGT GCGCACGGTG TTGCGTCTTG CCCATGAGCG CAACGAGATT GCTATGGTCG CAGACGAAAT CGGCAGCCCA ACCTATGCGC CTGATGCCGC CGCCGCGATT GCACGCCTGA TCGAAACACC CTACTATGGG ACGTACCATC TGGTCAACGA AGGGTCATGT TCGCGTTACG AGTTTGCGGC AGCGACGCTG CGGCTGGCGG AACGCACCGA TGTGACGCTA CGCCCGATCT CACTGGCAGA GTATCAACGC GCCAGCCGGG TGCCGCCGTA TACGCCGTTG CGCAACGTCG CCGCCGCCGA TCTGGGCATC CGCCTGCGAC CATGGGAAGA GGCGCTGACG GAGTATGTGG GTGGATTGAA GAACGGAGGG TGA
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Protein sequence | MRIAVTGAGG QLGKALQRVL SDAHEIIPLN HADLDLERSD CVQALVATDA QCVIHPAAYT HVDGCARDPD RAYRVNALGT RYVALACQAL DAPLVYVSTN EVFDGTATSP YLEYDRPAPI NPYGFSKWAG EQVVRELLRR FYIVRVAWLF GGERNFVRTV LRLAHERNEI AMVADEIGSP TYAPDAAAAI ARLIETPYYG TYHLVNEGSC SRYEFAAATL RLAERTDVTL RPISLAEYQR ASRVPPYTPL RNVAAADLGI RLRPWEEALT EYVGGLKNGG
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