| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1688 |
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| Symbol | |
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| ID | 5539164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2174414 |
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| End bp | 2174941 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893825 |
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| Product | TadE family protein |
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| Protein accession | YP_001431798 |
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| Protein GI | 156741669 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4961] Flp pilus assembly protein TadG |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.598074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000154995 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAGGC GATCCACAGG TCAATCGCTG GTTGAGATGG CGTTGATCGC ACCGATCCTG
TTCGCGCTGC TGTTTGCGAT CGTCGATCTC GGCTACTACA TCTGGGGCTA TTCGACGCTC
TTCAGCGCCG CGCGCGCGGG GGCGGAAGTC GCGTCGCAAC TGCCGCCCTA CGAGTCGCGG
CTGGCGTTGC GCGGCGCGGG CGATCCGCGC TGGCTGGAAG ACCCTTGCGT GCAACGCATC
CTGGAGGTCA CCAACGACTC GACCGGCTTC TTTCCGGTCG ATGCCAATCA GGTGACGATC
CTGTATCCGA ACACGCTCGA CCCCAACCCG CGACGCCTTG GGGGAACCAT CGAGGTGCGG
ATCGACTATG TGATCGAGCC GCTGACGCCG CTCGTCAGTT TTATCAACAC GATGCTGGGA
GACAACGGCA CGATGCGCAT CAAAGTGACG GCACAGCGCA CCATCGAAAG TTTGGGCAAT
AATCCTAATT TCGCTAATGG CATTGCCTGT ACGGAACCGC AACCGTAG
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| Protein sequence | MPRRSTGQSL VEMALIAPIL FALLFAIVDL GYYIWGYSTL FSAARAGAEV ASQLPPYESR
LALRGAGDPR WLEDPCVQRI LEVTNDSTGF FPVDANQVTI LYPNTLDPNP RRLGGTIEVR
IDYVIEPLTP LVSFINTMLG DNGTMRIKVT AQRTIESLGN NPNFANGIAC TEPQP
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