| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1665 |
|---|
| Symbol | |
|---|
| ID | 5539141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2145413 |
|---|
| End bp | 2145640 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640893802 |
|---|
| Product | RNA-binding protein |
|---|
| Protein accession | YP_001431775 |
|---|
| Protein GI | 156741646 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1837] Predicted RNA-binding protein (contains KH domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00331015 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0035897 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGT TGCTGGAATA CCTGGCGACC AGTCTCGTCG ATCATCCAGA AGCGGTGACG
ATCAAGGAAC GCACCGGTCG CTACACGGTG ACCTATCAAC TGACCGTCGC ACCCGACGAA
ACCGGCAAGG TCATCGGGCG CAGCGGGCGG GTCGCCAAAG CCATCCGCGA CCTGATGAGC
GTTGCAGCGG CGCGGCGGCA TAAGCGCGTC CACGTTGATA TTGAATAA
|
|---|
| Protein sequence | MKALLEYLAT SLVDHPEAVT IKERTGRYTV TYQLTVAPDE TGKVIGRSGR VAKAIRDLMS
VAAARRHKRV HVDIE
|
|---|
| |