Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1657 |
Symbol | |
ID | 5539133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2136993 |
End bp | 2137793 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893794 |
Product | DNA repair protein RecO |
Protein accession | YP_001431767 |
Protein GI | 156741638 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.887062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0015865 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTATCGTT GTGAAGCAAT CATCATCCGC AGATCCGATA GCGGCGAAGC GGATCGGGTG CTGACGATTC TGACCCCGTC GGGCAAGCAG CGTGTGATTG CGAAGGGAGC GCGCAAGATT CATAGTCGCC TGGCAGGGCA TATCGAACTG TTTACTCATA CCACCCTTAT GCTGGCGATT GGACGCAACC TGCACATCGT GACGCAGAGC AGTCCGTTGG ACCGCTTTGA GCATTTGCGC GCTGATCTCG AACGCATTGG CGCCGCGTAC TATGCCGCTG AACTGGTTGA TCGCCTGATC GCGGAAGAAA GTGAAAACCG ACGCGCGTTT GAGTTGTTGC TCGGCGCTTT ACGCGCACTC AATGCTGGCG CTGCCATCGA TCTCACCCTG CGCGCCTATG AGTTGCACTT ACTGGACGCA GTTGGCTACC GTCCACAGTT GTATGAGTGC GCTGCGTGCG GCGTGAGGCT GACCGAGGCG ACGGATCGGT TCAGTCCGGC AGCGGGAGGT GCGCTCTGCC CACAATGCGC TGGCGCTGAT CGTCGGGCGC TGCCAATGCG CCTGTCCACG TTCAAGTTGC TGCGCTATAT GCAGATACAA CCACCGGAGA TCGCCGGCGA GTTGCGGGTA TCAACCGCCA CGCGCGCCGA AGCGGAATCG TTGCTGCGCG CCTATCTACG CCATATCCTG GAACGCGACC TGCGTTCGCT GGCATTCCTC GACGATGTTC GACAGCACCC TGAACCATCC CTGTTCGTCG GATCAACCGG AGCTCAAGGA GATGACGATG AACGCGATTG A
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Protein sequence | MYRCEAIIIR RSDSGEADRV LTILTPSGKQ RVIAKGARKI HSRLAGHIEL FTHTTLMLAI GRNLHIVTQS SPLDRFEHLR ADLERIGAAY YAAELVDRLI AEESENRRAF ELLLGALRAL NAGAAIDLTL RAYELHLLDA VGYRPQLYEC AACGVRLTEA TDRFSPAAGG ALCPQCAGAD RRALPMRLST FKLLRYMQIQ PPEIAGELRV STATRAEAES LLRAYLRHIL ERDLRSLAFL DDVRQHPEPS LFVGSTGAQG DDDERD
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