Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1632 |
Symbol | |
ID | 5539108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2109168 |
End bp | 2110283 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893769 |
Product | inner-membrane translocator |
Protein accession | YP_001431742 |
Protein GI | 156741613 |
COG category | [R] General function prediction only |
COG ID | [COG4603] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0105884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGCG CTGAATCGCA ATCTTCTCCG CAGGCGGATC GTCTGGCGCC ACTGCGCGGT CTGCTGCGCG CCATGATTGT GCCGGTTATT TCAGTCGTGG TGGCGCTGGC GATTGGCGCG GTGATCATCT CGGTCTCCGG GGCGAACCCG CTGGTGGCGT ATCGTGCTCT GTTCGAGGGA GGGTTGGGGA GCGCGCGGGC AATCGGGCGC ACATTCGAAA AGGCAACGCC GCTGATCTTT GGCGGTCTGG CAGTATCGCT GGCGTTCAAG TGCGGGTTGT TCAATATCGG CGCGCAGGGT CAGTTGTTGC TCGGCGCCGT GTTTGCAGCG TTTATTGGCT TCAGCCTGCA AGGACTGCCC GCCATGGCGC ATATTCCGCT GGCGCTGCTG GTTGGGGCGA TCATGGGCGC GCTGTGGGCA GCGATTGCCG GTACGCTTAA GGCGTTCACC GGGGCGCATG AAGTCATCAC GACGATCATG CTCAATTTCG TCGCTTTCAA CCTCACCGAC TGGTTAGCGG ACGGACCCTG GAAGGATCGC TCGCCGGGGA ATATTGTGGC GCGCACGCCT GCCGTGGCGC CCGAAGCACG CCTGCCCGAC ATCGCCGGCG TACCACTCGG GATGATCCTG GCGGTGCTGA TGGCGATTGC CGTCTGGTGG TTGATCTGGC GCACAACAAT CGGGTTCGAG TTGCGCACCG TCGGGCAGAA TGCGAGTGCG GCAAAGTATG CTGGTATCTC GGTGCGTCGC ATGACCGTGC TGGCAATGGT CGCTAGCGGC TTCCTGGCGG GGCTTGGCGG GGCGATCGAG ACGCTTGGCG TCGTCGGGCG GTTTCAGCCG GGATTCAATG CCGGTCTTGG CTTTCAAGCG ATCACCATTG CGCTGCTGGC GCGCACTCAT CCAATCGCAG TCGTTCCGGC GTCGCTCCTG ATCGGCGTCA TGCAGGCGGG CGCCAGTCGT ATGCAATTCA ATTCGGGCGT GGCCTCCGAA ATTGTCGATG TCATTCAGGC GATCATCCTC TTCTTTGTCG CTGCCGAGAG CCTTATTCGC TGGGTGCTGC GCCTTCGCGC CGAAGAGGGT GAACGGGTGA CCCTGAGCAG TGGTTGGGGT TCGTAG
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Protein sequence | MERAESQSSP QADRLAPLRG LLRAMIVPVI SVVVALAIGA VIISVSGANP LVAYRALFEG GLGSARAIGR TFEKATPLIF GGLAVSLAFK CGLFNIGAQG QLLLGAVFAA FIGFSLQGLP AMAHIPLALL VGAIMGALWA AIAGTLKAFT GAHEVITTIM LNFVAFNLTD WLADGPWKDR SPGNIVARTP AVAPEARLPD IAGVPLGMIL AVLMAIAVWW LIWRTTIGFE LRTVGQNASA AKYAGISVRR MTVLAMVASG FLAGLGGAIE TLGVVGRFQP GFNAGLGFQA ITIALLARTH PIAVVPASLL IGVMQAGASR MQFNSGVASE IVDVIQAIIL FFVAAESLIR WVLRLRAEEG ERVTLSSGWG S
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