Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1564 |
Symbol | |
ID | 5539040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2009980 |
End bp | 2010456 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893702 |
Product | hypothetical protein |
Protein accession | YP_001431675 |
Protein GI | 156741546 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.764118 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTCCCA CCGGTTATGT GGCGCATCGC ACCGGAGATC GTGTTCGCCT GCGCATCCCG GCGCGCAAAG GCGATACAGC CTACTTCGCG CGCGTCGAGC AGGAACTTGC CGCGTGTGGA CGAGTCGGGT TTGTCGAAGC CAATCCACTG ACCGCCAGCA TCCTGCTGCA CTATAGCGGC ACAGAAGACG ACCTGCGACG CGATGCGGTC GATCTTGGGT TGTTCACAAT CGAGGCAATC CCGCCAGCCG CCAATCCGGC GCTGAACGCT GCGGCTGCGC GGATCGATCA GATTGATCGC GTGATTCAAC GTTCATCGAA CGGATCGTTC GACCTGCTTG AAGTAGCATT CGTCGGGCTG GTCGGCGCCA GCATCGTTCA GGCGCTGCGC GGGCAGGCAT TAGGACCGGC GAGCACGCTC ATGGCGCATG CGCTGGCAAT TCTTGCGCTG CACCGCAGCC GCCGGGAGCG TGGGTGA
|
Protein sequence | MLPTGYVAHR TGDRVRLRIP ARKGDTAYFA RVEQELAACG RVGFVEANPL TASILLHYSG TEDDLRRDAV DLGLFTIEAI PPAANPALNA AAARIDQIDR VIQRSSNGSF DLLEVAFVGL VGASIVQALR GQALGPASTL MAHALAILAL HRSRRERG
|
| |