Gene Rcas_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1564 
Symbol 
ID5539040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2009980 
End bp2010456 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content63% 
IMG OID640893702 
Producthypothetical protein 
Protein accessionYP_001431675 
Protein GI156741546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.764118 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCCA CCGGTTATGT GGCGCATCGC ACCGGAGATC GTGTTCGCCT GCGCATCCCG 
GCGCGCAAAG GCGATACAGC CTACTTCGCG CGCGTCGAGC AGGAACTTGC CGCGTGTGGA
CGAGTCGGGT TTGTCGAAGC CAATCCACTG ACCGCCAGCA TCCTGCTGCA CTATAGCGGC
ACAGAAGACG ACCTGCGACG CGATGCGGTC GATCTTGGGT TGTTCACAAT CGAGGCAATC
CCGCCAGCCG CCAATCCGGC GCTGAACGCT GCGGCTGCGC GGATCGATCA GATTGATCGC
GTGATTCAAC GTTCATCGAA CGGATCGTTC GACCTGCTTG AAGTAGCATT CGTCGGGCTG
GTCGGCGCCA GCATCGTTCA GGCGCTGCGC GGGCAGGCAT TAGGACCGGC GAGCACGCTC
ATGGCGCATG CGCTGGCAAT TCTTGCGCTG CACCGCAGCC GCCGGGAGCG TGGGTGA
 
Protein sequence
MLPTGYVAHR TGDRVRLRIP ARKGDTAYFA RVEQELAACG RVGFVEANPL TASILLHYSG 
TEDDLRRDAV DLGLFTIEAI PPAANPALNA AAARIDQIDR VIQRSSNGSF DLLEVAFVGL
VGASIVQALR GQALGPASTL MAHALAILAL HRSRRERG