| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1563 |
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| Symbol | |
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| ID | 5539039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2006276 |
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| End bp | 2009836 |
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| Gene Length | 3561 bp |
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| Protein Length | 1186 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893701 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001431674 |
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| Protein GI | 156741545 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCAA CAGACCTTGC GGTTCAGCCA TCCTCACCTC CAGCCATCCT GGGCGTTGCC
GATCTCCTGC CTGTGCTCGA AAGAGCATTT GCGCAGGGCG GCACGTTTCG CGATATGCTG
GTTGCGTTGA GCGAGCACAG ACCATGCCTG ATCTCCGGTG CAGCGCTGCG TGAGGCGCTC
GATGCCTGCC ATGTCCGTCA GGCGCTCGAC GAGTTCCTGC CCTATCCACA GGTGGTCGAG
TCGCTCGATG AGGTGTATGT CACCCAAAGC GGCAACCAAT CGGTCATCGA ACTCCATTTT
GCACAGCCGC ATGCCATTCC CCAGAGCACT CCGATTGGCA CGGTGACCGT TCAGATCGAT
CGGACGTTGA CGCTGAGCAT CGATGAGCGT GGCGATGTAA CCCTCAAGCC GGGCGATATG
CGGCTGCGCT GGCTGGGAAT GACCGAACCT CTCCTGGTGC GCCTGCGCCG AATCGATGGT
CCCCAGGGCG CGCAGGATGT CGTCCAGGTG TCTGCCGGCA ATGTGCTGAG CCAGACAACC
CCGCTCTCGG TCCTGACCGT TCCAACCGCG CCTGCCCCCG CGATTGCGAT TGCGCCACCC
CCGCCACCCG CACCTGCTGC ACCGCCGGTC ACCATCACCG TCGTTGTCGT TCATCGGCTG
CCAGGACGGG TTCGCCTGCG TCCTGACGGC CTGTATCGCA ATCCGGCACA GAAAGAGCGC
ATCGAACGGC GCCTGGCGCG CCAACCCGGT ATTCGCGCTG TTGCGGCGAA TATACGAACC
GGTACGGTCC TTGTCCACTT CGACGCAACG ATGAGCATCG AAGAGGTGCA GGCGCGGCTG
GTTCAAGCGC TCACCGGCGC CGAAGAAGCC GATCCGCGCC AACCGCAGCA TCCCTGGCAC
ACGATGCCGG TTGCGGAAGT GGCGCAGATT CTCGGCGCTT CACTGAACAA CGGATTGGAC
CCGATCGCCG CCCGGCAACG ACTGCACGAA CTGGGCGCGA ATGCGCTACC TGATATTCAC
CGCCGTTCGA CCTTCAGTAT GCTGATCGAA CAGTTCAGCA GCCTGCCGGT GGCGCTACTC
GGCGTTTCGG CGATTCTGTC GATTGCAACC GGCGGCGTCG CTGATGGGGT TGTCATCCTT
AGTGTTGTGC TGATCAATGC CGGAATTGGC TTCTTCACCG AACACTGGGC GGAACAGACC
ATCGCCGGGC TAAGCCACAG CGCCAGACCG GTTGCGCGCG TAGTTCGCGG CGGCATCGAG
CACGACCTGC CAGGCGAAGA ACTCGTGCCA GGTGATGTGG TGGTGCTGAA GCGCGGTATG
CCGGTTCCTG CCGATGCACG CCTGATCGAG GCAGATGATC TGACGGTCGA TGAATCGGCA
TTGACCGGTG AGAGCATCCC GGTCGCCAAG CGCGCTGATG TGACTCTTGG TCGTGAGACG
CCGCTCGGCA GTCGGGCAAA CATGGTCTAT CGCGGCGCAA CCGTGACCGG CGGCGGCGGA
CGCGCGCTGG TCGTTGCAAC CGGCGCGACC ACCGAAGTCG GGCAGATACA GCGGATGCTC
ACCGAGACGG AACAACCCGA AACGCCGTTG CAGCGCCAAC TTCGGACGCT CGGCAGCCAG
CTGGCGCTCC TCTCGCTCGC CATCTGCGGT GGGGTGTTCG TCATTGGATT GCTCCGCGGT
CACGGCTTCC TGATGATGCT GAAAACGTCG GTGTCCCTGG CAGTCGCCGC CATTCCCGAA
GGGTTGCCAA CCGTCGCCAC CACCACGCTG GCGCTTGGTC TGCGCCGACT GGAACGCCAG
AATATTCTGG TGCGCCGCCT GGTCGCAGTG GAGACCCTTG GCGCAGCGCA GGATGTCTGT
CTTGACAAGA CCGGTACGAT TACGCTGAAT CAGATGACGC TGGTGACGGT CTTTGCCGGT
CGACACCTCT ACCGCCACGA AGAGGCGACA TTCCGGCGCG ACGAGGATGG CACGAATGGC
GCGCGCACGG GTGAATTGGC GTACCTGCTG CAACTCACTG CGTTGTGCAG CGAAGTGCGC
ATCGAGATGA CCAATGGTTC ACTCCGTTTG CAGGGGACGC CGACCGAGAT TGCGCTGGTG
CAGGCGGCGT TCGATGCTGG CATTGATGTG GCAGCACTAC GCCGGCGCCA TCCGCTGCTC
CGGGCGCAAC CGCGTAGCGA ACAGCGCGGC TATATGGTCA CCTGGCATGC CGATGACGAT
CATGAGTTGC TGGCAATTAA GGGCGCGCCG GATCAGGTGT TGGCGATGTG TAACCGCCAC
CTGTGCGACG GTGTGGTGCA GCCGCTCCTC GAGCGCGACC GTGTGCGCAT CGTCACCGAA
AATGAGCGCA TGGCAGGGCA GGCACTGCGT GTGCTTGGCG TCGCCTACGC TTATGGCAGT
GATCCGCCGG AGGAACGCCG TGACCTGATC TGGGTCGGGC TGGCAGGCAT CGCCGACCCG
CCGCGCCCCG GCATGCGCGA GTTGATGGCG CGCTTCCGCG CCGCCGGACT CCATCCGATT
ATTGTGACCG GCGATCAGAG CGCAACGGCG CATGCGATTG CCCGCCAGAT CGGGCTGCGT
CACGACGGAC GCCTGGAAGG GCTGGATGCC GCGCAACTCG AACACATCCC ACCCGATGTG
CTCCGTTCGC TGGCGCAACG GATCGACATT TTCTCACGGG TCAGTCCGGC GCACAAACTA
CGCATCGTGC AGGCGCTCCA GCGCGCCGGG CGCGTGGTTG CGATGACCGG CGACGGCATC
AACGACGGTC CGGCGTTGCG CGCCGCCGAT ATCGGCATCG CTATGGGGCG TGATGGCAGC
CAGCTGGCGC AGGAAGTCGC CGACATTGTG ATCCGCGATG ATAACCTGCA AACGATCATT
GTCGCCATCG AGCAAGGGCG CACAATCTAC GACGATATCA AGAAGGCGGT CCATTTCATT
CTGGCAAGCA ATGCCAGCGA GATTGCAGTC ACGTTGATCG CAACTGCTAT CGGGATAGGA
GAACCGTTCA ACCCGATCCA GTTGCTCTGG ATCAACCTGG TGACCGATAT TTTTCCCGAA
CTTGCACTGG GAGTCGAATT GCCGGAAGCG GATGTCATGG CGCGCCCGCC GCGTGATCCG
CACGCGCCAA TGTTTTCGCG CGCCGATTTA CAGAACATCG GGATCGAGGG CATGGTGCTG
ACTGCCAGTA CACTGGTTGT GTATGGCATA GGTCTGTCCC GTTATGGCAT CGGACCACGC
GCGAGTACGA TGGCGTTCTC GACGATTACA ACCGCGCAGT TGCTTCACGC ACTCAGTTGT
CGATCTGAGC GCCATAGCAT TTTTGCGCGC GGCGCCTGCC CTCCCAACCC CTATATGCCA
CTGGCTGTCG GCAGTGGACT CGGTCTTCAG GCAATGGCTA CTCTTCTGCC GGGATTGCGC
GGCATTCTTG GCACAATGCC GCTCGGACCA CTCGATTGGG TGATTGTGGC AGGAGCTGCC
ATTGTGCCCT TGATCGTAAA TGAAATCAAA AAGGAGATTG TTCACGCCCG TTTTCGAGAA
GAGACCCACG AAGAGAGGTG A
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| Protein sequence | MMPTDLAVQP SSPPAILGVA DLLPVLERAF AQGGTFRDML VALSEHRPCL ISGAALREAL
DACHVRQALD EFLPYPQVVE SLDEVYVTQS GNQSVIELHF AQPHAIPQST PIGTVTVQID
RTLTLSIDER GDVTLKPGDM RLRWLGMTEP LLVRLRRIDG PQGAQDVVQV SAGNVLSQTT
PLSVLTVPTA PAPAIAIAPP PPPAPAAPPV TITVVVVHRL PGRVRLRPDG LYRNPAQKER
IERRLARQPG IRAVAANIRT GTVLVHFDAT MSIEEVQARL VQALTGAEEA DPRQPQHPWH
TMPVAEVAQI LGASLNNGLD PIAARQRLHE LGANALPDIH RRSTFSMLIE QFSSLPVALL
GVSAILSIAT GGVADGVVIL SVVLINAGIG FFTEHWAEQT IAGLSHSARP VARVVRGGIE
HDLPGEELVP GDVVVLKRGM PVPADARLIE ADDLTVDESA LTGESIPVAK RADVTLGRET
PLGSRANMVY RGATVTGGGG RALVVATGAT TEVGQIQRML TETEQPETPL QRQLRTLGSQ
LALLSLAICG GVFVIGLLRG HGFLMMLKTS VSLAVAAIPE GLPTVATTTL ALGLRRLERQ
NILVRRLVAV ETLGAAQDVC LDKTGTITLN QMTLVTVFAG RHLYRHEEAT FRRDEDGTNG
ARTGELAYLL QLTALCSEVR IEMTNGSLRL QGTPTEIALV QAAFDAGIDV AALRRRHPLL
RAQPRSEQRG YMVTWHADDD HELLAIKGAP DQVLAMCNRH LCDGVVQPLL ERDRVRIVTE
NERMAGQALR VLGVAYAYGS DPPEERRDLI WVGLAGIADP PRPGMRELMA RFRAAGLHPI
IVTGDQSATA HAIARQIGLR HDGRLEGLDA AQLEHIPPDV LRSLAQRIDI FSRVSPAHKL
RIVQALQRAG RVVAMTGDGI NDGPALRAAD IGIAMGRDGS QLAQEVADIV IRDDNLQTII
VAIEQGRTIY DDIKKAVHFI LASNASEIAV TLIATAIGIG EPFNPIQLLW INLVTDIFPE
LALGVELPEA DVMARPPRDP HAPMFSRADL QNIGIEGMVL TASTLVVYGI GLSRYGIGPR
ASTMAFSTIT TAQLLHALSC RSERHSIFAR GACPPNPYMP LAVGSGLGLQ AMATLLPGLR
GILGTMPLGP LDWVIVAGAA IVPLIVNEIK KEIVHARFRE ETHEER
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