Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1561 |
Symbol | |
ID | 5539037 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2004133 |
End bp | 2005035 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893699 |
Product | hypothetical protein |
Protein accession | YP_001431672 |
Protein GI | 156741543 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAG CACTAACTGA TCAGGAAAAC TCTGCCAGCG CGACGGAGAC CGGTCCGTTC TACGGATGGC GGTTCATTCG CCGTGAACTG CCGGATGGCA TGATCGAATG GGCGCAGGTC CCGTTGACCT ACGAAGACGT TTTGCATCCT GAAGAGGGGG ATCAGGTGAC CCATAGCAGT CTGCACCAAC GGCGCTGGCA TTATCTGCGC GAAGTATTCG AGCGACAGGT CGCCGATGAT CCCACCGCTG TCGTGCTCGA CGATGTGCGG ATTGAATGGG ATGTTCCCGA TCTCAAACCG CACGGTCCTG ATCTGATGGT GATCTTCGGT GTGAAGGAGC GCAAGAACTG GAGCACTTTT CGGGTTGCTG AAGAAGGAGT GCGTCCTGCG TTGATTGTGG AAATCACCTC GCCGGAGACG CGCGGGCACG ATGTGATGAC GAAGGTCGAT CACTATGAGA TGGCAGGAGT GCCGCTCTAT GTGATTGTTG ATGGGATTGA ACGGCGTGGT CAATTGGGGG TGCGGCTGAT CGGGTATACG TTGACCCCGG AAGGGTACCG GATGCTCGCG CCGGATGATC AGGGGCGATT GTGGCTGGCG CCGGTGCGCG TCTGGTTAGG GGTGCGCAAC GGTGACATCA TTTGTTACGA TGAAGCAGGC AACCCGTTGG GCGATCACCT CGCGCTGGCG CAGGCGTTGC AGGAAGAAGA GCGCGCCCGC CGGGCCGCCG AAGCGCGCGC CGCCGAAGAA GAGCGCGCCC GCCGGGCCGC CGAAGCGCGC GCCGCCGAAG AAGAGCGCGC CCGCCGGGCC GCCGAAGCGC GCGCTGTGGA AGCCGAGTCG CGCATTCGGC AACTGGAAGC GGCACTGCGA CGGATGCAGC AAGGAGAGGA GCCATCTTCC TGA
|
Protein sequence | MSAALTDQEN SASATETGPF YGWRFIRREL PDGMIEWAQV PLTYEDVLHP EEGDQVTHSS LHQRRWHYLR EVFERQVADD PTAVVLDDVR IEWDVPDLKP HGPDLMVIFG VKERKNWSTF RVAEEGVRPA LIVEITSPET RGHDVMTKVD HYEMAGVPLY VIVDGIERRG QLGVRLIGYT LTPEGYRMLA PDDQGRLWLA PVRVWLGVRN GDIICYDEAG NPLGDHLALA QALQEEERAR RAAEARAAEE ERARRAAEAR AAEEERARRA AEARAVEAES RIRQLEAALR RMQQGEEPSS
|
| |