Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1556 |
Symbol | |
ID | 5539032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1997675 |
End bp | 1998217 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893694 |
Product | acetolactate synthase, small subunit |
Protein accession | YP_001431667 |
Protein GI | 156741538 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC ATACTATCGT CGCGCTCGTG CAGGACCGCC CCGGCGTGCT GAGCCGGGTG GTCGGACTCA TTCGACGACG CGGCTTCAAC ATCGAAAGTC TGGCAGTCGG ACATAGCGAA ACTCCCGGCA TCAGCCGGAT GACAATCGTT GTGGAGTGGG AGGATGTCGA GCAGGTGGTC AAGCAACTCT ACCGCCTGAT CGAGGTGCTG AAGGTCAGCG ACGTGACCAA CGATCCGACG GTCGAACGCG AAATGGCGTT GATGAAACTG CATGCGCCTC CGGCGAAGCG CCCTGAGATT GTGGCCCTCA CCGAAGTCTT CGACGCTAAA ATTGTTGATG TCGGCGCAAA TACGATGGTG ATCGAGATGA CCGGGTCGCC ATCCAAGGTG CAGAACTTTA TCGACGTGAT TCGCCCTTAT GGCATCAGAG AAATGATGCG CACCGGGCGG ATTGCGATGG TGCGCGGCGC GCGCGGTCAT ACCGCCGAGG AGTATGTCGA AAGCGCCAAC GGACACGCCG AGCGCGTGCC GGCGATGAAT TAA
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Protein sequence | MKKHTIVALV QDRPGVLSRV VGLIRRRGFN IESLAVGHSE TPGISRMTIV VEWEDVEQVV KQLYRLIEVL KVSDVTNDPT VEREMALMKL HAPPAKRPEI VALTEVFDAK IVDVGANTMV IEMTGSPSKV QNFIDVIRPY GIREMMRTGR IAMVRGARGH TAEEYVESAN GHAERVPAMN
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