| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1539 |
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| Symbol | |
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| ID | 5539015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1963532 |
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| End bp | 1964245 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893677 |
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| Product | Mg-protoporphyrin IX methyl transferase |
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| Protein accession | YP_001431650 |
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| Protein GI | 156741521 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR02021] magnesium protoporphyrin O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000799051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATGA TTGATATTAC TCGACATAAA AATACCTTGC GCGACTATTT TGACCGTGAC
GGCTTCCGGC GCTGGAGTGC GATCTATGGC GATGCGGAGG TGTCGCGCAT CCGGCGCACG
ATCCGTGTCG GGCATGCCCG CATGCTGGCG CGTGCCGAGA CCTGGTTGCT GGAATGGATC
GGCGCAACAG GGCGCGCGCC GTCGAGTCTG AGCGCGCTCG ACGCCGGGTG CGGCACGGGT
CTCTTCAGCA TTATGCTGGC GCAGCACGGC ATCAACGTCA CTGCGGTCGA TATTGCGCCA
CAGATGGTTG CCGCAGCCGC CGAACGGGCG CAGACGGCAG GGGTGGCGCA GCGGATCACG
TTCACAGCCG GCGATATCGA GGATGTTGCC GGCGTTTTTG ACGTGGTGGC GTGCTTCGAT
GTGCTGATCC ACTATCCCCA ACCGGCGTTT GATCAGTTGC TCAGACATCT GGCGCAGCGT
GCCCGCGGCA TGTTGCTTTT TACCTATGCG CCGTATGAAC CGTTCCTCGC GGCAATGCAC
TGGATCGGCG GCTTCTTCCC GCGCGCCCAT CGGCGAACCG AGATTCAGAT GATCCGCGAG
AACGATGTGC GTCGCCTGGT TGCCGGTCAC GGATTGCGCG TCGGTCGAAT CGAACCGATC
CGCAGCGGTT TCTACCATGT GAATCTCGTT GAGGCGCGTG GTGTGAGGGG TTGA
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| Protein sequence | MAMIDITRHK NTLRDYFDRD GFRRWSAIYG DAEVSRIRRT IRVGHARMLA RAETWLLEWI
GATGRAPSSL SALDAGCGTG LFSIMLAQHG INVTAVDIAP QMVAAAAERA QTAGVAQRIT
FTAGDIEDVA GVFDVVACFD VLIHYPQPAF DQLLRHLAQR ARGMLLFTYA PYEPFLAAMH
WIGGFFPRAH RRTEIQMIRE NDVRRLVAGH GLRVGRIEPI RSGFYHVNLV EARGVRG
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