Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1513 |
Symbol | |
ID | 5538989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1934377 |
End bp | 1935369 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893651 |
Product | ribonuclease III |
Protein accession | YP_001431624 |
Protein GI | 156741495 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.01126 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCG TTGAATCTGT GGCGCAGGCG CATCCCCGTG ACCAGCGCAC GATTGATGCG GAGCAACCCA CCTTTTCGAT TGTAGCGCCG GTATATAACG AAGAGGTGTT ATTGCCGGAG TTTTACCGGC GTGTTGTGGC AGCGATCGAG CCGCTGGGTG AGCCGTTCGA GATTGTGTTG GTGAACGATG GATCGCGCGA TCGCTCGCTC CAGATCATGC TGGAACTGCA CGAACGCGAT CCGCGCGTCA AAGTGATCAA CTTTTCACGC AACTTCGGGC ATCAGATTGC GATCACTGCC GGTACCGACT ACGCGCGCGG CAGGGCAGTC GCTGTGATCG ACTCGGACCT TCAAGATCCG CCGGAAGTGA TCGTGGACAT GATCGCCCGC TGGCGCGAAG GGTACCAACT CGTTTATGGC GTGCGATCCG AACGTGAAGG CGAAACGGCT TTCAAACTTG CCACTGCTTC CCTCTTCTAC CGCCTCATTC GCAAAATTAC CAGCGTCGAT ATTCCTGCCG ACACCGGCGA CTTCCGCTTG ATGGATCGCA AGGTGGTCGA TGCGCTCAAG TCGATGCGTG AGCATCACCG CTTCATGCGC GGGTTGTCGG TGTGGGTCGG CTTCAAGCAG ACTGGCGTCA CCTACAAGCG CGACGCGCGC AAGGCGGGGG TGACGAAATA TCCGCTGCGC AAAATGCTGA AGTTTGCGAT GGACGGTATT ACCGCATTCT CGTACCTGCC GCTGCAACTG GCAACCTATG TGGGGTTCGG CGTGGCGGCG CTCGGGTTGC TCGGCATTAT TGCGGTGATC ATTCTGCGTC TGCTCGGCAA TGAGCTTCTG GGGCAGGCGA CGACGCTGGT GGCGGTGCTG TTCATGGGGG GCGTGCAGCT GGTCTTCCTC GGCATCCTCG GCGAATACCT GGGTCGCATT TACGATGAAG TCAAGCAGCG CCCCCTCTAT ATCGTCGCCG ATGCGATCGG GTTCGATGAA TAA
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Protein sequence | MTFVESVAQA HPRDQRTIDA EQPTFSIVAP VYNEEVLLPE FYRRVVAAIE PLGEPFEIVL VNDGSRDRSL QIMLELHERD PRVKVINFSR NFGHQIAITA GTDYARGRAV AVIDSDLQDP PEVIVDMIAR WREGYQLVYG VRSEREGETA FKLATASLFY RLIRKITSVD IPADTGDFRL MDRKVVDALK SMREHHRFMR GLSVWVGFKQ TGVTYKRDAR KAGVTKYPLR KMLKFAMDGI TAFSYLPLQL ATYVGFGVAA LGLLGIIAVI ILRLLGNELL GQATTLVAVL FMGGVQLVFL GILGEYLGRI YDEVKQRPLY IVADAIGFDE
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