| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1496 |
|---|
| Symbol | |
|---|
| ID | 5538971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1911869 |
|---|
| End bp | 1912393 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640893634 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001431608 |
|---|
| Protein GI | 156741479 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.174494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAA TATCATCGCG TTCTGCGCAG AATGAGCATA TGAATCAGAT CATCGATAGC
GCACTGGCGC TGATCTATCG CATGGCGCAT GCCACGCGCG GCGCACTCTG GCGCCTTACC
CGTCCATCGC TCCTTGGCGT GCGCGCTCTG GCAGTGCGCG ACGATCAGGT GTTGCTGGTG
CGTCATCGCA GCGGCGCAAC CCCGTGGGGA TTGCCCGGCG GCGCCGTCGA TCCCCACGAA
CGGCTCGAAG AAGCTGCGCG CCGCGAGATC TACGAGGAAT CCGGCGTAAC GGCGGAGACT
CAGCGCGTGC TCGGGGTCTA TGACGCTTTC AATTTCAATT ATGTCAATTA TATTGTCGTC
TTTGTCTTCA GTGCACAAGG TGAACCAGGA CCGCCCCACT CGATTGAAAT CGCCGAAGCA
CGTTTTTTTC CGTTTTATGA TTTGCCCAAT GGCGTTGACC CCGGATCGCG CCGGCGGATC
GACGAATATC TGTCCGGCGC TGCGGGCATC TCGGCATTGT GGTAG
|
|---|
| Protein sequence | MRRISSRSAQ NEHMNQIIDS ALALIYRMAH ATRGALWRLT RPSLLGVRAL AVRDDQVLLV
RHRSGATPWG LPGGAVDPHE RLEEAARREI YEESGVTAET QRVLGVYDAF NFNYVNYIVV
FVFSAQGEPG PPHSIEIAEA RFFPFYDLPN GVDPGSRRRI DEYLSGAAGI SALW
|
|---|
| |