Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1462 |
Symbol | |
ID | 5538936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1864782 |
End bp | 1865462 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893600 |
Product | hypothetical protein |
Protein accession | YP_001431575 |
Protein GI | 156741446 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0873129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTAGAAA GGCGCCCCAT GGCCCAGGTA TTCGATCGGA GAGCCAATAC GCTCGCCAGG GTGAGTATTT TTGCCGGTAT TCCGCTGGTG CTGGCGATTC TCGGCGGAGT CTGGTGGCTG TTCGGCTGGT CGGACTGGCA CCGTGACGTG GGTGTCGAGA TTCCACAGCC CGGCGGCGGG TTCAACCATC AACTGCACGT CGCGCTGGGA ATGGATTGCC GCTACTGCCA TACGGCGGTT GAGGTCTCGG CTCACGCGAA CATTCCGCCA ACCGAGACGT GTATGGGGTG TCACTCGCAG ATCATCAGCC GCAGCGAAAA GGTCGCTTTC GTCTGGCAGA GTTGGGAAAC CGGGACTTCT ATTCAGTGGA ATAAAGTTCA CGACCTGCCC AAGTTCGTCT ACTTCAACCA TAGCATCCAT GTTGCCAAGG GCGTTGGCTG TTCGACGTGC CACGGGCGCA TCGATCAGAT GCGCGTGGTG TACAAGACGC AGCCGCTGTT TATGTCGTGG TGTCTGGATT GCCACCGCAA CCCGGAGAAG TATGTCCGCC CGCGTGAAGA AGTCTTCAAT ATGGCGTGGA CACCGCCACC CAATCAACTG GAGGTTGGGC GACGCCTGGT GCAGGAATAT GAAATTCGCT CGTCGTGGGA ATTGACGAAT TGCGCCATTT GCCACCGCTA G
|
Protein sequence | MLERRPMAQV FDRRANTLAR VSIFAGIPLV LAILGGVWWL FGWSDWHRDV GVEIPQPGGG FNHQLHVALG MDCRYCHTAV EVSAHANIPP TETCMGCHSQ IISRSEKVAF VWQSWETGTS IQWNKVHDLP KFVYFNHSIH VAKGVGCSTC HGRIDQMRVV YKTQPLFMSW CLDCHRNPEK YVRPREEVFN MAWTPPPNQL EVGRRLVQEY EIRSSWELTN CAICHR
|
| |