Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1460 |
Symbol | |
ID | 5538934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1862905 |
End bp | 1863330 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893598 |
Product | hypothetical protein |
Protein accession | YP_001431573 |
Protein GI | 156741444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.355787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGGT TCTTTCAGTA TCTCAATGTT TTCCCAATGC CACTCTGGCT GGCGATGATG TTCGCCCCCG GGAATCCGCT CACCGAGCGG ATGAGCCGTC CGGGACCACT GTTTATCATC ACCGGGCTGA ACTACATTGT CGCACTGGCG CTGGCAGTAC GGCGCGGGCA GCGCGATGGC GCGGCAATAG ATTTTACCTC ACTTGAGGGA ATTCGCAAGG GGATGAGTTC GCCGGAAGGC GCTGCTGCGG CGTGGGCGCA CATGCTCGCC CTCGATCTCT TCAGCGGCGC GTGGATCTAC CGTGAGTGCC GCCGTCTGAA CGCACCCTGG CAGGTGCGCA TCCCCGCGCT CTTTGCAACG TTGATGGCAG GTCCTGCCGG ATTGATGGGG TTTCTGCTCT GGCGTTTGAG GAAAGGCGAG GAATGA
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Protein sequence | MERFFQYLNV FPMPLWLAMM FAPGNPLTER MSRPGPLFII TGLNYIVALA LAVRRGQRDG AAIDFTSLEG IRKGMSSPEG AAAAWAHMLA LDLFSGAWIY RECRRLNAPW QVRIPALFAT LMAGPAGLMG FLLWRLRKGE E
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