Gene Rcas_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1438 
SymbolpheS 
ID5538911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1831677 
End bp1832720 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content61% 
IMG OID640893575 
Productphenylalanyl-tRNA synthetase subunit alpha 
Protein accessionYP_001431551 
Protein GI156741422 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0016] Phenylalanyl-tRNA synthetase alpha subunit 
TIGRFAM ID[TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTGA TCGATCAGTT GAATCAGCTT GAACAGGAGG CGCTCGCAGC GCTTGATCAT 
GCCGCCGATC TGACGGCGCT CGCCGAATGG AAGAGCGCCT ATCTTGGCAA GCAGGGGGCG
CTTTCGCGTT TGAGTCGGGG GCTTGGCGCG CTGCCGGCCG AGGAACGTCC GGCTGCCGGA
GCGCGTTTCA ATGCCGCACG CGCCACGCTC GAACAGGCGC TCGAACGCGC TGAAGCGCAG
TTGAAACGCG CGGCGCGTCA GCACGCCTTT GAAGCCGATC AGGTCGATGT TACCCTTCCC
GGACGCGCTC CCGCCGTCGG ACGGTTGCAC CCCACCACGC AGATGCTTCG CACGATCTAC
ACGATTCTGG GGGAGATGGG GTTTCAGGTG TGGGAAAGCC CGGAAGTCGA AACCGATGAG
TTCAACTTCC AGTTGCTCAA TATGCCACCA GACCATCCGG CGCGCGATAT GTGGGATACA
TTCTATGTCG AAACTGCGTC CGGCGAACCG ACGCTCCTGT TGCGCACGCA TACGTCGCCG
GGGCAGATCT ATGCGATGCG CGCCAATGCG CCAAATCCGG TGCGCGCCAT TCTGCCCGGC
AAGTGTTATC GCTACGAACA GGTGACGGCG CGCCACGAGA TGCAGTTCTT TCAGGTTGAA
GGCATTGCCA TCGGTGAACG GATTTCCTTC GCCGACCTGA AGGGAACGCT GGTGGCCTTC
GCCGAACGGC TGTACGGTAA AGGGGTGAAA ACCCGCTTCC GTCCGAGTTA CTTCCCCTTC
ACCGAGCCAA GCGTCGAGTT CGATATCGAG TGCTTCCTCT GCGGCGGCGC GGGGTGTCGC
GTCTGTAAGC ATTCCGGGTG GCTCGAAATC CTTGGCGCGG GCATGATCCA TCCCACGGTG
TTGCGCAATG GCGGGTACGA CCCGGAAAAG GTCAGCGGGT TTGCGTTCGG GATGGGACCA
GAACGGATGG CGATGTTGCG CTATGGTATT GACGACATTC GCTGGTTCTT CAGCGGCGAT
GAGCGGTTTC TGCAACAGTT CTGA
 
Protein sequence
MSLIDQLNQL EQEALAALDH AADLTALAEW KSAYLGKQGA LSRLSRGLGA LPAEERPAAG 
ARFNAARATL EQALERAEAQ LKRAARQHAF EADQVDVTLP GRAPAVGRLH PTTQMLRTIY
TILGEMGFQV WESPEVETDE FNFQLLNMPP DHPARDMWDT FYVETASGEP TLLLRTHTSP
GQIYAMRANA PNPVRAILPG KCYRYEQVTA RHEMQFFQVE GIAIGERISF ADLKGTLVAF
AERLYGKGVK TRFRPSYFPF TEPSVEFDIE CFLCGGAGCR VCKHSGWLEI LGAGMIHPTV
LRNGGYDPEK VSGFAFGMGP ERMAMLRYGI DDIRWFFSGD ERFLQQF