| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1409 |
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| Symbol | |
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| ID | 5538882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1801707 |
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| End bp | 1802360 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893546 |
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| Product | TadE family protein |
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| Protein accession | YP_001431522 |
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| Protein GI | 156741393 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.659631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTG CAGGTGGAAA GGGCGCGACT TCCCGGCACA ACGCCACAAC CGATACCAAA
CGGTCACAGG AAGTCAGGAA GGGCAGGAAC GCCCACAGCG CCATCGCCGG TCACAACAGG
TCCAGACAGC GAAGGGACAT CGGCACACAA GAAGCGTCCC TCCGGGAGGA TGATATGGTC
AAACACGCAT ACATCGTCGC CCACAGGCAT GTGCGCGAAC CCCGCCGGGG ACAGGCGCTC
ATCGAGATGG CGCTCGTGCT CACCGTGCTG CTAGTCATCA TTTTCGGCGG AGTTGCGGCA
CTTCAGGCGA TTGGCGCGCA CTATACCGTG AACCAGGCAG TGCGAGTGGC AGCACATCAG
GCAGCGCTGC GTGGCTCGAC CGGCGGATTG GCGTATGACC GCGATTATCC ATTGGCGACT
GCGCCGGGAC CGGTGGCGGA CGCAGCGCGC ATAGCCTTTG CCGGGAGCGT GTTCGTCGAG
CCGCAGCACG CAACAATCAG GGCGCATTGT TCAACACATC CGTGCCGCCG CTATAGCGAC
ATTACTGTCA CAATCCGCTA TCAGGCGGAC GTCTGGACGC CAATTCCCGG ATTGACCGAT
ATTCGGGTCC ATCGTAGCGC CACGCGCGCA GCGGAACAGG ACACGCAAGA CTGA
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| Protein sequence | MNVAGGKGAT SRHNATTDTK RSQEVRKGRN AHSAIAGHNR SRQRRDIGTQ EASLREDDMV
KHAYIVAHRH VREPRRGQAL IEMALVLTVL LVIIFGGVAA LQAIGAHYTV NQAVRVAAHQ
AALRGSTGGL AYDRDYPLAT APGPVADAAR IAFAGSVFVE PQHATIRAHC STHPCRRYSD
ITVTIRYQAD VWTPIPGLTD IRVHRSATRA AEQDTQD
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