Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1380 |
Symbol | |
ID | 5538853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1765543 |
End bp | 1766652 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640893518 |
Product | hypothetical protein |
Protein accession | YP_001431494 |
Protein GI | 156741365 |
COG category | [S] Function unknown |
COG ID | [COG2718] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02877] sporulation protein YhbH |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATTC ACCGCGCTGA GCGTGATTTG AACCGGTTCC GCCAGATTGT ACGCGGCAAG ATCAAAAAAG ACCTGCGCAA GTACATGTCG CAGGGCGAAA TGATTGGACG CCAGGGGCGC AAATATGTGT CGATCCCGCT GCCGCAGATC GATCTGCCGC AGTTCCGCTA TGGCACACGC CAGAGTGGCG GGGTTGGGCA GGGCGATGGC AACGTTGGCG ACCCAATTGG GCAGGGTGAT GGCCAGTCGG GGCAGGGCGA GGCTGGCTCG GAACCAGGGC AGCACGTGAT CGAGGTCGAT GTTACCATCG AAGAATTGGC GCAAATCCTT GGCGAAGAAC TGCAATTGCC CAACATCCAG CCCAAGGGCA AAAAGAATAT TGTCTCGCAG AAGGATCGGT ATTCCGGCAT TCGCCGTGTT GGTCCCGACT CGCTGCGGCA TTTCAAACGC ACCTATCGCG AAGCGCTCAA ACGCCAGATT TCGTCGGGTG AGTACAACCT CGCCGATCCG ATCGTCGTGC CGATCCGCCA GGATATGCGC TATCGCTCCT GGAAGGAAAC GCTTCAGCCA GAGTCGAACG CGGTCATTAT CTACATGATG GACGTGAGCG GCTCGATGGG CGCTGAGCAA AAGGAGTTGG TGCGCATCAC GGCATTCTGG ATTGAAACCT GGCTGCGCTC GCAGTACAAG GCGATCGATA TTCGCTATAT CGTTCACGAT GCTGCTGCAA AAGAGGTCGA TCAGGAGACG TTCTACCACA TCCGCGAAGG CGGCGGCACC AAGATCAGTT CGGCGTACAA ATTGTGCAAT AAACTGATCG ATGAGCGCTA CCCGGCTGAT GAGTGGAATA TCTATCCGTT CCACTTCTCC GATGGCGACA ACTGGGGTGG CGGCGATACG CGCGAGTGCA TCGAATTGCT GCGCACCCAA CTTCTTCCCA AGGTCAATCA GTTCTGCTAT GGTCAGGTGC GTTCGCTCTA CGGCTCGGGG CGCTTTGCGC ACGACCTCGA AGAGCACCTG GGCAAGCATG AGGCGCTGGT GATCTCGGAG ATTGCCGATC GCGACGATAT CTACGATGCG ATCAAGGATT TTCTTGGCAA GGGTCGGTAG
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Protein sequence | MSIHRAERDL NRFRQIVRGK IKKDLRKYMS QGEMIGRQGR KYVSIPLPQI DLPQFRYGTR QSGGVGQGDG NVGDPIGQGD GQSGQGEAGS EPGQHVIEVD VTIEELAQIL GEELQLPNIQ PKGKKNIVSQ KDRYSGIRRV GPDSLRHFKR TYREALKRQI SSGEYNLADP IVVPIRQDMR YRSWKETLQP ESNAVIIYMM DVSGSMGAEQ KELVRITAFW IETWLRSQYK AIDIRYIVHD AAAKEVDQET FYHIREGGGT KISSAYKLCN KLIDERYPAD EWNIYPFHFS DGDNWGGGDT RECIELLRTQ LLPKVNQFCY GQVRSLYGSG RFAHDLEEHL GKHEALVISE IADRDDIYDA IKDFLGKGR
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