| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1351 |
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| Symbol | |
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| ID | 5538823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1728765 |
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| End bp | 1730111 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893488 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001431465 |
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| Protein GI | 156741336 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGAT TGTCCGCACT CGTCGCGCCT GAATACGCCC GAACCGGAAC CGCGCTGCTG
ATCGGGCTGG TCGTTGCGCC GCTCACCGGT GTGCTGGCAG CGACACAGCC ATTCCTGCTG
CTGGCATTTC TTGGCGCTGC GGCATGGGTA TTCCTGGTGT TGCGCGGCGG CGCCGCTGCG
TTCTTCGTGA TGGGGACAGC AGCCCCGCTC CTCTATCTGA TCGATGTGCG CAGCGCGCTC
TTCGGTCAGG CGTTGCTGGC GCTCTATGGT ATGGCGCTCA TTCACGCACT GTATCAGGTC
GCGCAACAAC CGGATGCCAG ACGATGGAAT CGCCGGCTGG TCTTCTTCGC CGTTGGGTGG
GGAGTCGTCG TCGCGCTGGC TGAACGGGCG CTCTTAAGCG AAGGGGTCAG TCTGCGACGC
CTGGTGATGA CTGCCATCGG TACGCTTCCT TACCTGTGGT TTGCGCTGAC AGCGCCACGC
ATGGCGAAGG GCGATCAGGC GCATGCATTG CTCGGTGGCG TCGCCATTGG TGCAACTGTC
GTTGCAGGAG CGTTTCTTAC CAATTCACGC TCGCTGACTG AAGGACTTCA AGGGCGGGAT
GCCTGGATCG ATACCTACAC GGTGATCGGC AGTTTGAAGA ATTCGCTGGG GTTGTTGTGG
GTCATTGGTT GGACCCTTCT GCTGGGATGG CGCACCAGAG GCGGGTGGAT GCTCAGAGCG
CCGCTGCTCG CCATTCTGCT GGCCGCCATC CTCTTCTCGT TCAGTCGCTC ATCCTATATG
GCGTTGATTG TTGCAACCCT GATGGTGTAC CGCGGTCATT CACTGAAATT GTGGGTCATT
GCGGGAAGCA TAGGCGCATT CGTGCTATTC GGTCTGCCGG AAGCCGTATG GGCTCGTCTA
CAAATGACTT GGTCGCCGGG ACGCGGGTTC GACCCGTCGG CAGAGACGCG CATCGATCTG
TGGGTTGCGG CGATCAATGC CTTTCTCTCC GCTCCGCTAA CCGGTATCGG ATGGGGGAAA
TTCAGCGAGT ATCTGGTGCG CACCGGTCAG GCGCCTATCG CAGCCGGATC GGCAGTGTAC
GACCTCGGCT ACGCCCATAA CTACTTTCTC AGCGCCTTTG CCATGCTTGG CATTGGCGGA
GGGATGTTGA ACATCGGCGT GTTTTTGGCG GCATGGCGGC GCGCACGCAC CCTTGCAGCA
CGTCAGAGTC CACTGGGGCG CGTCGTGCAG GCAGCGGTGC TGGCAGTGTT CGTGGCGTCG
ATGTTCGGCG AACCGCTCTT CGATCCCATT CTCGCATTTG TGTTCGTTCT TATCCTGGCA
TGCCTCGTTG GGCAGGAAGG TGAATGA
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| Protein sequence | MSRLSALVAP EYARTGTALL IGLVVAPLTG VLAATQPFLL LAFLGAAAWV FLVLRGGAAA
FFVMGTAAPL LYLIDVRSAL FGQALLALYG MALIHALYQV AQQPDARRWN RRLVFFAVGW
GVVVALAERA LLSEGVSLRR LVMTAIGTLP YLWFALTAPR MAKGDQAHAL LGGVAIGATV
VAGAFLTNSR SLTEGLQGRD AWIDTYTVIG SLKNSLGLLW VIGWTLLLGW RTRGGWMLRA
PLLAILLAAI LFSFSRSSYM ALIVATLMVY RGHSLKLWVI AGSIGAFVLF GLPEAVWARL
QMTWSPGRGF DPSAETRIDL WVAAINAFLS APLTGIGWGK FSEYLVRTGQ APIAAGSAVY
DLGYAHNYFL SAFAMLGIGG GMLNIGVFLA AWRRARTLAA RQSPLGRVVQ AAVLAVFVAS
MFGEPLFDPI LAFVFVLILA CLVGQEGE
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