| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1342 |
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| Symbol | |
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| ID | 5538814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1718879 |
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| End bp | 1720888 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893479 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431456 |
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| Protein GI | 156741327 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAT CGCCCCTCAC TCCCCTGGTA TGTATTCCGC TTCCGACCGG CGCCGTTCGT
CCGCGCGGCT GGTTATATCG CCAGTTGCGC TTGCAAGCAG ACGGTTTGAG CGGGCATCTC
GACCAATGCT GGCCCGATGT GGCGGATAGC GCCTGGATCG GCGGCGCTGC CGAGGGTTGG
GAACGCGGAC CGTACTGGCT CGATGGCATG GTTCCGCTGG CATTTGTTCT CAACGATGCT
TCCTTGATTG CCAGGGTCTC CCGCTGGATC GACATTATCC TTGAGCAGCA GCACGATGAT
GGCTGGCTCG GACCGCGGCG CGACGCCAGC GATGCACGAC GTCGCTCGCT TGATCCCTGG
CCCGTCTTTG TGCTGTTGAA AGCGTTGAGT CAGTTCCAGG AAGCCACCGG CGACCGGCGA
GTAATCCCGG CAATGTTGCG CTTCCTGCGC CGACTCGATG CTCTCCTCGA CGAACAGCCA
CTCTTCGACT GGGGGCGCTA TCGCTGGGCA GACCTGGTCG TCTCGCTGCA CTGGCTCTAT
GATCGCACTC GCGAGTCATG GCTGCTCGAC CTGGCGGAAA AGGCGCAGCG CCAGGGGTTC
GACTGGCGCG CTCACTTCGA GCAGTTTCCA TATCCATCAC GACAGCGGCG CGAAGACATC
TATCCTCCCG CTCCACTCCC TGGCTGCACC TTCCGTCTCG ATATGGCGTC GCACGTGGTC
AACAATGCAA TGGCGATCAA AACTTCTGGC GTCTGGTATC GCCAATCGGG TGATCCGCGC
GACCGCGACG CCGTCTGGCA GGCGATCGAG ACGCTCGACG CCTTTCATGG GCAGGTAAAC
GGTGTCTTCA GCGGCGATGA GCATCTTGCC GGACTCAACC CGTCTCAGGG AACCGAATTG
TGCGCTGTCG TCGAGTATCA GTATTCACTT GAAACGTTGA TCTCCATGCT GGGAGATCCA
CGCCTGGCAG ATCGGTTGGA GCGCATCACG TTCAATGCCC TGCCCGCAGC CTTTGCTCCC
GATATGTGGT CGCACCAGTA TGTGCAGCAG GTGAACCAGA TTCGCTGCGC CATTCTTGAA
GACAACATCT ATACCAACAA TCGCGCCGAC GCCAACACCT TTGGTCTGGA GCCGAACTAT
GGCTGCTGCA CTGCCAACAT GCACCAGGGA TGGCCCAAAT TTGTCACTCA TCTCTGGATG
CGCACATCTG GCGATGGACT GGCAGCCGTG TCATATGCGC CCTGCGAACT GACGATGACC
GCAGGCGGGA GGAGGGTGCG CCTGACGGTT GAGACCGATT ATCCATTCGA TGAGTCGGTG
CGCATTGTTG TAGAGAGTCG CGCGGCTGCG CGATTTCCGC TGTTGCTCCG CTTTCCCGGC
TGGGCTGTCG GAGCGACGCT CTCCATCGAT GGCAGGCGCG AGACCGTGCA TCCGGGAACA
TTTCATCGTG TTGAACGTGT ATGGGATGGC GCCGTCACGA TTGATCTGCA TCTGCCGATG
CGTGTGGCGG TGACACGCCG ACCGTCCGGC AGTGCAGCGA TTGAGTATGG TCCGCTGGTT
TTCGCGCTGC CGATTGGTGA GACATGGCAG CGCATCGTTC CCGATGCCCA GGGGCGGTAT
GCTGCGGGTG AACGGCTGCG TCCCGGCTGT CCGCCGGACA TTGCCGATCG CCTTGGTGAT
TGGGAAGTGC TGCCGACGAC CCCATGGAAC TATGGGCTGG AACTGGATGC CGCGCAGCCC
GAACGGTCTG TTCGTATCGT CCATCACCCG GTCGGCGAGC GTCCGTTCTC GCCGGAAGGG
GCGCCGGTAG CGGCATATGC CCATGGTCGG CGCATTCCGA CGTGGGGAGA GGAGCATGGC
GCTGCGGGTC CGCCACCGGC GCCGGTTCAC GTCGATACGT CGCTCGAAGT CGTGCGTCTC
ATTCCCTATG GTTGCACCAA TCTGCGCATT GCCGAATTCC CGCTGCTGGA ATCCGGGTCA
ACGACGCTTC AGGACAGCGG CACGCCGTAG
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| Protein sequence | MKSSPLTPLV CIPLPTGAVR PRGWLYRQLR LQADGLSGHL DQCWPDVADS AWIGGAAEGW
ERGPYWLDGM VPLAFVLNDA SLIARVSRWI DIILEQQHDD GWLGPRRDAS DARRRSLDPW
PVFVLLKALS QFQEATGDRR VIPAMLRFLR RLDALLDEQP LFDWGRYRWA DLVVSLHWLY
DRTRESWLLD LAEKAQRQGF DWRAHFEQFP YPSRQRREDI YPPAPLPGCT FRLDMASHVV
NNAMAIKTSG VWYRQSGDPR DRDAVWQAIE TLDAFHGQVN GVFSGDEHLA GLNPSQGTEL
CAVVEYQYSL ETLISMLGDP RLADRLERIT FNALPAAFAP DMWSHQYVQQ VNQIRCAILE
DNIYTNNRAD ANTFGLEPNY GCCTANMHQG WPKFVTHLWM RTSGDGLAAV SYAPCELTMT
AGGRRVRLTV ETDYPFDESV RIVVESRAAA RFPLLLRFPG WAVGATLSID GRRETVHPGT
FHRVERVWDG AVTIDLHLPM RVAVTRRPSG SAAIEYGPLV FALPIGETWQ RIVPDAQGRY
AAGERLRPGC PPDIADRLGD WEVLPTTPWN YGLELDAAQP ERSVRIVHHP VGERPFSPEG
APVAAYAHGR RIPTWGEEHG AAGPPPAPVH VDTSLEVVRL IPYGCTNLRI AEFPLLESGS
TTLQDSGTP
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