| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1341 |
|---|
| Symbol | |
|---|
| ID | 5538813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1718232 |
|---|
| End bp | 1718672 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640893478 |
|---|
| Product | membrane protein of unknown function |
|---|
| Protein accession | YP_001431455 |
|---|
| Protein GI | 156741326 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1950] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACT CTCCTCCACA ACCGCCTACC CGCTGGCAGA TGGCGCGCAG CCTGGTGCTA
CGCTGGCTGG TGACTTCGCT GGCGATCTTT GCCGCCATTC AGATCGTGCC CGGCATCGAG
TTTGTCGGTC CCGGCTGGGA AATTGGACTG GTCGCGCTGC TGTTTGGGTT GGTCAACACG
GCGTTGCGCC CGATCCTGAC CCTGCTCACC TGCCCGCTGG TGCTGCTGAC GCTGGGGCTG
TTCACCCTGG TGATCAACGC CCTCCTGCTC TTGCTGACGG CCTATATTGC TGGCGGACTT
GGGGTGCAGT TTCGCGTCGA TAGTTTCTGG TCGGCGTTTC TTGGCGGACT GGTCATTGCC
ATCGTCAACA CGCTGCTCCT CTGGATGGCA GGAGAAGCGC CGGTGCGCAT TATTGTGCAA
AACGACCGGT CGGATCGCTA A
|
|---|
| Protein sequence | MIDSPPQPPT RWQMARSLVL RWLVTSLAIF AAIQIVPGIE FVGPGWEIGL VALLFGLVNT
ALRPILTLLT CPLVLLTLGL FTLVINALLL LLTAYIAGGL GVQFRVDSFW SAFLGGLVIA
IVNTLLLWMA GEAPVRIIVQ NDRSDR
|
|---|
| |