Gene Rcas_1324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1324 
Symbol 
ID5538796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1703618 
End bp1703974 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID640893461 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 3 
Protein accessionYP_001431438 
Protein GI156741309 
COG category[C] Energy production and conversion 
COG ID[COG0838] NADH:ubiquinone oxidoreductase subunit 3 (chain A) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ACTATCTGCC CATTCTGACG CTGTTCCTGG TGGCGATGTT CATCGCTGTC 
TTTGTCATTG TGCTGTCGCG CTACCTGGGA CCACAGCGCC CCAACCGACG CAAGTTGATG
CCGTATGAGT CGGGGATGGA GCCGATTGGA CCGGCACAGC GCCGTTTTCC GATCAAGTTC
AATCTGGTAG CGATGCTGTT CATCCTGTTC GATATCGAGA TTATCTTCCT TTTTCCTTAT
GCGCTGGTGT ATCGGCAACT CGGCGTTCCC GGGCTGGCGG TGATGGGAGT GTTCTTTGTG
GTGCTGGTGA TCGGACTGGT GTATGAGTGG CGGCGAGGAG CGTTACGATG GGAATAG
 
Protein sequence
MLIDYLPILT LFLVAMFIAV FVIVLSRYLG PQRPNRRKLM PYESGMEPIG PAQRRFPIKF 
NLVAMLFILF DIEIIFLFPY ALVYRQLGVP GLAVMGVFFV VLVIGLVYEW RRGALRWE