Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1323 |
Symbol | |
ID | 5538795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1703124 |
End bp | 1703627 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893460 |
Product | NADH dehydrogenase subunit B |
Protein accession | YP_001431437 |
Protein GI | 156741308 |
COG category | [C] Energy production and conversion |
COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATAG AGCAGAAGGC AGGCGATATG GGGATTGTCA CCGCCTCGCT CGAGCAGGTG GTGAACTGGA GCCGCTCTAA TGCCATGTGG CCCCTATTGT TCGGGCTGGC ATGCTGCGCC ATCGAAATGA TGGGCGCGCA GGGCGCCAAT TATGACCTGT CGCGCTTTGG CATGGAGATT AACCGCGCAT CGCCGCGCCA GGCGGATCTG ATGATCGTCG CGGGGCGCGT GTCGCGCAAG ATGGCGCCAG TGGTGCGCCG CCTCTACGAT CAGATGGCGG ACCCAAAGTG GGTGATTGCT ATGGGCGATT GTGCTGCATG CGGCGGGGTG TTCAACAACT ATGCAATTGT GCAGGGGGTC GATGAGATTG TGCCGGTCGA TGTGTATGTC GCCGGGTGCC CGCCGCGCCC CGAGGCGCTG ATCGATGGGA TCATTCATCT GCACGAGAAA GTCCGGCGTA TGCGGCTCGA TGGCACACTG CGCGAACCGG TTCATCTGTC GTAA
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Protein sequence | MGIEQKAGDM GIVTASLEQV VNWSRSNAMW PLLFGLACCA IEMMGAQGAN YDLSRFGMEI NRASPRQADL MIVAGRVSRK MAPVVRRLYD QMADPKWVIA MGDCAACGGV FNNYAIVQGV DEIVPVDVYV AGCPPRPEAL IDGIIHLHEK VRRMRLDGTL REPVHLS
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