Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1283 |
Symbol | |
ID | 5538755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1655812 |
End bp | 1656309 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640893421 |
Product | hypothetical protein |
Protein accession | YP_001431398 |
Protein GI | 156741269 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.252037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGCTG AAAGCACATT CGATATTGTC TCCGATTTCG AGCGTCAGGA ATTGGTCAAC GCCATTGATC AGGCGCGGCG TGAGGTTGCC ACGCGATATG ATTTGAAAGA CACTAAAACC GAGATTGTTT TGAGTGAGAA GGAACTGACC ATAACGACCG AATCGGAGAT GCATCTTGCC GCAGTGCGCG ATCTGGTTCA GACGAAAGCG CTGCGGCGCA ATCTTTCGAT TAAGATCTTT AAGTTCGGTC CGGTTCAGGA AGTGAGCGGC GGTCGGGTGC GGCAGGTTGC AACATTACAG CGCGGCATTC CTGAAGATGT GGCAAAAAAA TTGGCGAAAC TCATTCGCGA TCATTTTCCG AAAGTGCAAC CGCGTATTCA GGGGGATGCC TTGCGCGTTG GGAGCAAAAG TCGTGATGAG TTGCAGGCGG TGATTCGTCT GGTGAAAGAA CGTCAGGATG AATTTGATAT TCCGCTTCAG TTTACCAACT ATCGTTGA
|
Protein sequence | MPAESTFDIV SDFERQELVN AIDQARREVA TRYDLKDTKT EIVLSEKELT ITTESEMHLA AVRDLVQTKA LRRNLSIKIF KFGPVQEVSG GRVRQVATLQ RGIPEDVAKK LAKLIRDHFP KVQPRIQGDA LRVGSKSRDE LQAVIRLVKE RQDEFDIPLQ FTNYR
|
| |