| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1280 |
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| Symbol | |
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| ID | 5538752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1650439 |
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| End bp | 1652061 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893418 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431395 |
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| Protein GI | 156741266 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.624288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAC GCTCGTTGGT CTATCGAATG GTCGTCCTCT TTGCGTGTCT TGTTGGATTG
GCGACCGTCT TCTTCGCTTA TCGCACCAGC GCTGCCGCCG TGTATATCGT GCGTGGTCCG
ACGACGGCTG TCTGTTCGAT CACCGGTCAA ACGGCGCCGG CGACGTTTCA GGACAGCATC
TTTGGTTCCG AACTCCACGG ATTTCTCGAC CAGGAAAGTG TGACGATCAG TTTTCAATTT
CCCGATGGAC GCATCTTCAG CCCCAACGAC ACCCGGTTGC TCGATGGGGT GGTCGATCTG
CCGCCACACT TTGCGCTGCC TCCATACCGC GCCGATGTCG CCGGCGATCT CTACTTCGAG
TTCCCGGTGA CGAACAAATG GCCCTATGGA TGCTACCGAC TGACCGCTGT GGGACAGGGC
AGTCGGCAAA CAGCAGTCGG CTATCTGGTC GTGACGCCAC GCACCGGTCC GCCGCCGGCG
CCAAGCCCGG CGCGCCTGGC AGTGTGGAAC AATGGCACGT TTAATGCTTT TGCATTCCAC
GATGATCTGA TCAACATTCA CGGCACAAAC TTTTTCCCCA ATGAGGTCAT TTCGATCTGG
ATCACCCAAC CGGACGGCAC GGTTCTCGAC TATCCGCAGC AGGTCGCCAG CGACATCGGC
AATTTCCAGT CGTCCTTTAT TTTCACGAAT GCGCACCAGA CCGGCAAATA CACCTTCACC
GCGCTGGGAA CGTTGAGCGG GTATCAGGTC TTTGCGCCAT TCGAACTGCG GGCGCGCTCC
TCGACGCCAA GCGGATGGGC GCAACTGCGC GTCGCCTTCC CGGCGCAGGC TTCGACGCGC
CAGAATGGCG GCATCGCCAT TACGGGATCG CTGTTTGCGC CAGGCGAGTA TGTCGGCCTG
TGGATGACGT TGCCGAATAA TGCGGTACGC AGCCTGCCAA CGCAGGTCGC CGACGGCAAT
GGCGACTTCT TTGTGGTGAT CGATCTCGAC GAGCGATTGC CGACGGGACG CTACAGCATC
ACCGCTAAAG GAGTCGCCAG CGGACGCTTG CAGATCGCCG GGTTCGACGT CACGCCGGGA
AGCTTCCAAC CGGCGTCGGC GAATAATCCT GCCGAACCTG TGCCGGCGGT GGTCGAGTCG
AACGTCGGCG ACCAGACGGA GGTTGGGGCG CTCACAACCA CAAGCGCAGC GCGCGCCTCA
GTGACATTCC TGGATCGCAC CGGCGCCGCC GACACCGTGC GGGTCGAAGG GTCGGGCTAC
GCACCCAATG AGCCGGTTGG CATCTGGATG ACCTTCCCCG ATGGCGCCGT GCTCGGCATG
GCAAGCCTGA ACGTCGATAG CAACGGCACA TTCAGCGTCG ATGTCGATCT GGGAGTCGTG
CTCACCGCAG GGCGCTATCG CGTCAGTGTG CAGGGGGTTG ACAGCAATCG ACTGGTGATC
GTGACATTCG ACGCTGCGGA CCGTGGCGCA CCCGGCGGTG TTGCGCCTTC CACGGCGCCG
ATCCAGACGC TGGGCGGACC GACGAACCTT GGCGGGACGG CAGGCAACCC GGGACCGGAG
CAGACGCCGC GCGATCAGCA GCGTTGCGCT GAACCAGAAG CATTCTGGAC GCCAGATTGC
TGA
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| Protein sequence | MKSRSLVYRM VVLFACLVGL ATVFFAYRTS AAAVYIVRGP TTAVCSITGQ TAPATFQDSI
FGSELHGFLD QESVTISFQF PDGRIFSPND TRLLDGVVDL PPHFALPPYR ADVAGDLYFE
FPVTNKWPYG CYRLTAVGQG SRQTAVGYLV VTPRTGPPPA PSPARLAVWN NGTFNAFAFH
DDLINIHGTN FFPNEVISIW ITQPDGTVLD YPQQVASDIG NFQSSFIFTN AHQTGKYTFT
ALGTLSGYQV FAPFELRARS STPSGWAQLR VAFPAQASTR QNGGIAITGS LFAPGEYVGL
WMTLPNNAVR SLPTQVADGN GDFFVVIDLD ERLPTGRYSI TAKGVASGRL QIAGFDVTPG
SFQPASANNP AEPVPAVVES NVGDQTEVGA LTTTSAARAS VTFLDRTGAA DTVRVEGSGY
APNEPVGIWM TFPDGAVLGM ASLNVDSNGT FSVDVDLGVV LTAGRYRVSV QGVDSNRLVI
VTFDAADRGA PGGVAPSTAP IQTLGGPTNL GGTAGNPGPE QTPRDQQRCA EPEAFWTPDC
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