| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1234 |
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| Symbol | |
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| ID | 5538703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1594635 |
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| End bp | 1595879 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893369 |
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| Product | ABC-type Fe3+ transport system periplasmic component-like protein |
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| Protein accession | YP_001431349 |
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| Protein GI | 156741220 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGCCG AAACCAGAGA CTGGCGCCGA TCGCGCCGGG CTTTTCTGCG TGCAGCGGTT
GGCGCCGGTG CAGGCGCCAT TCTTGCCGCC TGTGGCCAGG CTGCTCCAAC AGCCCCGGCA
GCAACGACCG CTCCGGCTGC GACCACGGCG CCCGCAGCCG AAGCAACCGC ACCTGCCCAA
CTCCCATCGC CGCCTGCACC TGGTCCATTG ACCGCTGCGG ATGCCGGCGG CATAGAGAAG
TTGATCGAAC GGGCGCGCGC GGAAGGCAAC CTGTCCACCA TTGCGCTGCC GGACGATTGG
GCAAACTATG GCGAGATGAA GCAGAAATTT CTCGAGAAGT ATCCCTTCAT CAAACACGAA
GATCTCAATC CCGACGCCAG TTCCGCGCAG GAGATCGAGG CGATCAAAGC CAACGCTGGC
AGCAAGGGCC CACAGGCGCC CGATGTAATC GATGTCGGGT TCACCTGGGG CGATACGGCA
AAGAAAGAAG GTCTCCTCCA ACCTTACAAG GTTGAGAAGT GGGATGAAAT CCCGGAGACG
CTGAAAGACC CCGAAGGGTT CTGGTATGCC GACTACTATG GCGTTATGGC GTTTGAAGTG
AACACGCAGG TGGTTCAGAA CATCCCGCAG GACTGGTCGG ACCTGTTGAA GCCGGAGTAT
AAGGGGCAGG TGGCGCTGGC AGGCGACCCG ACCGGTTCCG GGCAGGCGAT CAACGCGGTG
TGGGCTGCGG CGCTCGGCAA CGGCGGCTCG CTCGACAATC CCATGCCGGG GCTGGAGTTC
TTCAAGAAAC TGAACGAGGC GGGCAACCTG CTGCCGGTTG TCGCCAAACC TGCAACCATC
GCCAAGGGCG AAACGCCCAT CGCGCTGCGC TGGGATTATA ATGCGCTGGC AAACCGCGAT
CAGAACGCCG GGAATATCGA CATCGCCGTG GTTGTGCCGA AAAGCGGATC GCTAGCCGGC
GTCTATGTGC AGGCGATCAG CGCCTATGCG CCACGCCCGC ACGCAGCCCG GCTCTGGATG
GAGTTCCTCT ACTCCGATGA GGGTCAGTTG ATCTGGCTTA AGGGGTACGC GACGCCGGCG
CGCTTCGAGG CAATGCGCAA AGCCGGGTTG ATCCCGCAGG ATTTACTCGA CAAATTGCCG
AAGACCGATG CGCCTGTGGC GTTCCCAACC GGTGGTCAGA TCAATGCTGC CTTCGACATG
ATCAAGAGCA ACTGGCCTAC GGTCGTTGGT GCAACGGTGC AGTAG
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| Protein sequence | MSAETRDWRR SRRAFLRAAV GAGAGAILAA CGQAAPTAPA ATTAPAATTA PAAEATAPAQ
LPSPPAPGPL TAADAGGIEK LIERARAEGN LSTIALPDDW ANYGEMKQKF LEKYPFIKHE
DLNPDASSAQ EIEAIKANAG SKGPQAPDVI DVGFTWGDTA KKEGLLQPYK VEKWDEIPET
LKDPEGFWYA DYYGVMAFEV NTQVVQNIPQ DWSDLLKPEY KGQVALAGDP TGSGQAINAV
WAAALGNGGS LDNPMPGLEF FKKLNEAGNL LPVVAKPATI AKGETPIALR WDYNALANRD
QNAGNIDIAV VVPKSGSLAG VYVQAISAYA PRPHAARLWM EFLYSDEGQL IWLKGYATPA
RFEAMRKAGL IPQDLLDKLP KTDAPVAFPT GGQINAAFDM IKSNWPTVVG ATVQ
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