| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1197 |
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| Symbol | |
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| ID | 5538663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1547478 |
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| End bp | 1547987 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893329 |
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| Product | PHA accumulation regulator DNA-binding protein |
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| Protein accession | YP_001431312 |
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| Protein GI | 156741183 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5394] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0298431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACCA TCAAAAAGTA CGCCAACCGC AAACTGTACC ACATTGACCG CAAACAGTAC
ATCACGCTCG AAGGCATTGC TGCACTGGTG CAGGCGGGAG AGCAGGTACG GGTGATCGAC
AATGAGACGG GTGAGGATAT TACGGCGCAG ATTCTCGCAC AGGTCGCGCT TCAGACTCGC
GGCGACCATG GGCGATTGCC GACATCGCTG TTGACCAGCC TGATCCGCGC CGGTGAAGGG
ACGTTGAGCG GGTTGCAGCG CTCACTTCTG GGGGCGTTCG GCGGCATCGG GTTCGTCAAT
GCCGAAATCG AACGTCGTCT GGCGTATCTC CGTGAAACAG GCAGGCTCGA CGATGATGAA
GTTCAGCGAT TGCGCACTTT GCTGGTAGAC TCCTACGACA CGGCGACGGC GCCTGGTCTT
CCGAGCAAGA GCGATGTCGA TCGGTTGCAC GAGCAGGTCG ATGAACTGAT GAAACTCGTT
GAGCAACTCC TCGCGCAACA GAAGAAATAA
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| Protein sequence | MQTIKKYANR KLYHIDRKQY ITLEGIAALV QAGEQVRVID NETGEDITAQ ILAQVALQTR
GDHGRLPTSL LTSLIRAGEG TLSGLQRSLL GAFGGIGFVN AEIERRLAYL RETGRLDDDE
VQRLRTLLVD SYDTATAPGL PSKSDVDRLH EQVDELMKLV EQLLAQQKK
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