| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1176 |
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| Symbol | |
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| ID | 5538642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1521790 |
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| End bp | 1522479 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893308 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001431291 |
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| Protein GI | 156741162 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.149936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA CCATCCTGAT TATCGAAGAT GAAGCCAGCA TCCGCACCGT TGCGCGCGCC
TACCTCGAAC AGGCGGGGTT TCGCGTGCTG CTGGCGGACA GTGGACCCGA AGGAGTGGAA
CTGGCGCGCC ACGAGTGCCC CGATCTGGTC ATTCTCGACC TGAATCTGCC AGGGATGGAC
GGGATGGAAG TCGCCGCACG GCTGCGGCAG GACTCAGATG TGTTCATCGT TATGCTCACA
GCACGCAGTG AGGAGAGCGA CCGGGTCGCC GGGCTGCGCA TTGGCGCCGA CGACTATGTC
ATCAAACCGT TCAGCCCACG CGAACTGGTG GCGCGAGTCG AAGCGATCCT GCGTCGTCGC
CGATCCACAA CCCCAGCAGT GAATTCTACC TTACGCTTTG CGCACATGCA GATCGACCCG
GACCGGCGCG AGGTCACTGT TGGCGATCAG ACAATCGATC TGACAACGAC CGAGTTCGAC
GTGCTTTTGG CGCTGGCGCG GCGTCACGGC AGAGTGTTGA GCCGTGAACA GATCCTCGAT
CTGGTGTGGG GAAACGATTT TTACGGCACC GACCGTGTGG TGGATGTGTA CGTTGGGCAG
GTGCGCCGCA AACTGGAAGC GGTCGCCGGT GTTTCGCTCA TCCAGACGGT GCGTGGCGTT
GGATACAAGT TCATCGATGA AGCGGTATAA
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| Protein sequence | MNATILIIED EASIRTVARA YLEQAGFRVL LADSGPEGVE LARHECPDLV ILDLNLPGMD
GMEVAARLRQ DSDVFIVMLT ARSEESDRVA GLRIGADDYV IKPFSPRELV ARVEAILRRR
RSTTPAVNST LRFAHMQIDP DRREVTVGDQ TIDLTTTEFD VLLALARRHG RVLSREQILD
LVWGNDFYGT DRVVDVYVGQ VRRKLEAVAG VSLIQTVRGV GYKFIDEAV
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