Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1110 |
Symbol | |
ID | 5538576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1437043 |
End bp | 1439859 |
Gene Length | 2817 bp |
Protein Length | 938 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893244 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_001431227 |
Protein GI | 156741098 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase [COG2608] Copper chaperone |
TIGRFAM ID | [TIGR00003] copper ion binding protein [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0214095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTATATC TGATATTTGC AACAATCGGA AAAGTAACGA TGCCTGAACA AACGATACAT CTTGCCGTCA CCGGCATGAC CTGCGCCTCC TGCTCGGCGC GTGTCGCAAA GGCGTTGAAG AAGGCGCCCG GCGTGACAGA TGCGACGGTT AACCTGGCGA GTGAGCAGGC GGAAGTGCAT TTCGATTCGT CCCTGGTGAC GCCGGACCGC CTGATCACGG CGGTTGAGGA AGCCGGGTAC GGCGTGATCA CCGAACATGT CGATATTCCG ATCACCGGCA TGACCTGCGC CTCGTGCGCG GCGCGGATCG AAAAGGCGTT GCGCCGCGTT CCCGGCGTCA TTGATGCCGC CGTCAATCTG GCGAGCGAGC GTGCCACAGT AACGTTCACG CCGGCGGATG TCACCTGGAG CGATCTGGTT GCTGCGATTG AAGATGCCGG GTATGGCGTG ATCGACCAGC GCACCGCAGC GGATGCTGGC GAAGATGGCG AGGCGGCGGC GCGCGCGCGC GAACTGGCAA ACCGCCGTCG GACATTGACG GTCGCTGTCG TTCTGACGGC GCCGCTCTTC CTGCTTTCGA TGGGGCGCGA CCTGGGGTTG ATCATGCCCT GGCTGATCGG CGCGGGCGCG GAGATGGCAC GCTCCATGAG CGGACCACTC CACGAGATGA TGAACCATAT CGCAGCGCGC GATGATCTGC TCAACTGGCT GTTCATGATC CTGGCGACGC CGGTGCAGTT TTATGCCGGG CGCGATTTCT ACGTCCACGC CTGGAAAGCG CTGAAGAACC ATCGCACGGC GACCATGGAC ACGCTCATCG CCGTTGGGTC GTCGGCGGCG TACTTCTACA GCGCAGCGCT GATGGTCACC GGCATGGCGG GACACGTCTA TTTCGAAACA GCAGCGGTGA TTATCACCCT CATTCTGGTG GGGAAATACC TGGAAGCTCG CGCAAAGAGT CAGACCGGCG CCGCAATCCG GGCGCTGATC GGGTTGCAAC CAAAAATGGC GCGTGTGGTG CGCGGTGGTC GCGAAGTGGA CATTCCAGCC GCCGATGTGC GTCGCGGTGA TATCGTTGTT GTGCGCCCCG GCGAGAAAAT ACCGGTCGAT GGCGTCATCA TCTCCGGCTC GTCGGCAGTC GACGAGAGCA TGATCACTGG TGAGAGCATG CCGGTGGAGA AGCGTGAGGG GGATACGGTC ATTGGTGCGA CGCTGAACCG CAGCGGCGGT TTCCAGATGC GCGCAACACG GGTTGGCAGG GAGACGGCGC TGGCGCAGAT CATTGCGCTA GTGCAGCAGG CGCAGGGGAG CCGCGCGCCG GTGCAGCGCC TTGTCGATCA GGTGTCTGCC GTGTTCGTGC CGATAGTCCT GCTGGTTGCG CTCTTGACCT TTCTTGGCTG GTTCTTCATT GGCGGAACGG GATTCACACA GGCGATGATT TTTGCCGTGG CGGTGCTGGT CATCGCCTGC CCCTGCGCGC TTGGCCTGGC GACGCCGACA GCCATCATGG TGGGGGTTGG CACGGGTGCG GCGCATGGCA TTCTGATCAA GAATGCCGAA AGCCTGGAAC GCGCCGGAAA AGTGCAGACG GTTGTGCTCG ACAAAACCGG CACGGTGACC GTCGGCAAGC CGGCGGTCAC CGACATTGTC GTTCACGCGA CAGATGCGCT GGCGTCTGTT GTGCAGAGCG CACCCTTGAT CCAGACGCAG GCAGATGACA GTGTGCATCC AAATGGCTCG CAAGACGTTG TTCGTCAGAC ATCTGATGCT ACGGCGATGG CAACGATCCA TGGCATTTCC GTCGCTGCTG CCGATCTCGG TGATCGGCGC GCGGATCTCG AACAGTTCCT GAAGAGCGTG GGAGATGGCG ACCTTCCTGA TGCTCATCCG CTGTCCGCAG CCGTCACCCG CGTCGCGCAA CAACGTACCG AACTGCTGAG ACTGGCGGCG AGCGCTGAGT CGCGCAGCGA ACACCCGCTC GGCGAAGCTA TTGTGCGCGC GGCGCAGGAC GCAGGCATCA GCGTTGTCCA GCCTGAACGC TTTGAAGCGA TTGCCGGGCA CGGCGTGATT GCCTTGGTCG AAGGGCGGAC GATCGTGATC GGCAACCCGG CGCTGATGCT CGATCGCGGC ATTGATACCT CGGCGCTCGA CGCGCATGTG GCGCGCTTGC AGAGTGAAGG CAAAACGGCA ATGATTGTCG CTGTCGATAG AATGGCAATG GGCGTCATTG CCGTCGCCGA TACGGTCAGG CACACGTCGC GCGCGGCAGT CGAAACGTTG CACCGCCGGG GAATTGACGT ATTGCTGATC ACCGGCGACA ACCGGAGAAC AGCGGAAGCG ATTGCGCGTC AGGCGGGGAT CGATCGGCAC AAGGTGTACG CCGAAGTTCG TCCAGAAGAC AAGGCGCGCA TCGTCCGCGA GGTGCAAGAA GGTGCAGGGA TGCGCCGGAT TGTCGCCATG GTCGGCGACG GAATCAACGA CGCGCCAGCG CTGGCGCAGG CGGATGTCGG CGTTGCTATG GGCAGCGGCG CCGATGTGGC GCTGGAAACC GCCGATATTG CTCTTATGCG CGGCGATCTG CATGGTGTGG CGCAGGCAAT CGATCTCAGC CGGCGCACCC TCCAAACGAT TCGCTGGAAC TTGTTCTGGG CGTTTATCTA CAACGTCTTG CTCATCCCGG TCGCTGCTGG TGCGCTCTAC CCCTTTACCG GCTGGCAATT GAACCCCATG CTGGCAGCTG GCGCAATGGC GTTCAGTTCG GTCTTCGTTG TGACCAACTC ACTGCGGTTG CGGCGGGCGC TCAGTGTTGA ACGTTGA
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Protein sequence | MLYLIFATIG KVTMPEQTIH LAVTGMTCAS CSARVAKALK KAPGVTDATV NLASEQAEVH FDSSLVTPDR LITAVEEAGY GVITEHVDIP ITGMTCASCA ARIEKALRRV PGVIDAAVNL ASERATVTFT PADVTWSDLV AAIEDAGYGV IDQRTAADAG EDGEAAARAR ELANRRRTLT VAVVLTAPLF LLSMGRDLGL IMPWLIGAGA EMARSMSGPL HEMMNHIAAR DDLLNWLFMI LATPVQFYAG RDFYVHAWKA LKNHRTATMD TLIAVGSSAA YFYSAALMVT GMAGHVYFET AAVIITLILV GKYLEARAKS QTGAAIRALI GLQPKMARVV RGGREVDIPA ADVRRGDIVV VRPGEKIPVD GVIISGSSAV DESMITGESM PVEKREGDTV IGATLNRSGG FQMRATRVGR ETALAQIIAL VQQAQGSRAP VQRLVDQVSA VFVPIVLLVA LLTFLGWFFI GGTGFTQAMI FAVAVLVIAC PCALGLATPT AIMVGVGTGA AHGILIKNAE SLERAGKVQT VVLDKTGTVT VGKPAVTDIV VHATDALASV VQSAPLIQTQ ADDSVHPNGS QDVVRQTSDA TAMATIHGIS VAAADLGDRR ADLEQFLKSV GDGDLPDAHP LSAAVTRVAQ QRTELLRLAA SAESRSEHPL GEAIVRAAQD AGISVVQPER FEAIAGHGVI ALVEGRTIVI GNPALMLDRG IDTSALDAHV ARLQSEGKTA MIVAVDRMAM GVIAVADTVR HTSRAAVETL HRRGIDVLLI TGDNRRTAEA IARQAGIDRH KVYAEVRPED KARIVREVQE GAGMRRIVAM VGDGINDAPA LAQADVGVAM GSGADVALET ADIALMRGDL HGVAQAIDLS RRTLQTIRWN LFWAFIYNVL LIPVAAGALY PFTGWQLNPM LAAGAMAFSS VFVVTNSLRL RRALSVER
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