Gene Rcas_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1099 
SymbolmraY 
ID5538565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1422837 
End bp1423928 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content59% 
IMG OID640893233 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionYP_001431216 
Protein GI156741087 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.648033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGAAA CCCTCCAGGC GCTCCTGGTA CAGGATATGG CAAGGGCGCT GCTGCTGGCG 
GCAGCCGCCT TTGTTCTGAC CCTCGCAACG GGTGGATACT GGATCCGGTT CCTGCGTCGC
CATCGAATCG GCAAGCAGAT CCGTCTCGAA GGACCGCAGA GCCACCAGAT CAAGACCGGC
ACGCCAACGA TGGGTGGAAT TATCATCCTG CTGCCGGTGA TTGTCCTGAC TGTTGCGTTC
AACCTGATTG ATCGCTGGTC AATCCTGCTG CCACTCGCCG TTCTGGTCGC ATTCGCAATT
CTCGGCGCCA TCGACGATTA TATGTCGCTG GTCGGCAGCC GGTCGAAGAC GTATGGCTTT
ACGCCGCGCA CCAAGATGGC ACTGATGATG CTGATCGCCT TTGGCGCTGC GCTGGCGCTC
TACCTGCCAC CGCCGTTCGG TCTGGCAAAC TTTGGGCAGG TGCGCGTTCC GTTTATGGGG
CAGTTCGACA TTGGTCTGTG GTTCATTCCG TTTGCGATGC TGATTATCGT TGGCACGAGC
AACGCGGTGA ACCTCACCGA CGGACTCGAC AGTCTGGCGG GCTGGAACCT GACACTGGCA
TTCGCCGCTT ATGGGGTGAT TACGTTCCTG AACGGCGAAT TTATCAACCT GATGGCGTTC
TGTTTCACGC TGGTCGGCGC ATGCGCGGCA TTCCTCTGGT ACAACGCGCA TCCGGCGCAG
GTGTTCATGG GCGATCTCGG ATCACTGTCG CTGGGCGCAG TGCTGGGAGT CATTGCCCTG
CAATCGCAGC AGTGGTTGCT GTTGCCGGTC GTCGGTCTGG TCTTTGTCGC AGAAGCGCTC
TCGGTCATTC TTCAGGTCGG GTATTTCAAA TGGACCAAAC GACGCACCGG CGTCGGACGG
CGGATTTTCA AGATGTCGCC GCTGCACAAT CACTTCGAAT TGCTCGGTTG GAGCGAAACG
CAGGTGATGC AACGCTTCGT GCTGGTGGGC ATGGTGGCGG CGCTGGTCGG CATTTCGCTG
GCATTGACGA TCAACGAAGC GCAGCGGGCG CGGATGACGG TCGAACGTCC GGCGATTACG
GTAGAACGAT AG
 
Protein sequence
MRETLQALLV QDMARALLLA AAAFVLTLAT GGYWIRFLRR HRIGKQIRLE GPQSHQIKTG 
TPTMGGIIIL LPVIVLTVAF NLIDRWSILL PLAVLVAFAI LGAIDDYMSL VGSRSKTYGF
TPRTKMALMM LIAFGAALAL YLPPPFGLAN FGQVRVPFMG QFDIGLWFIP FAMLIIVGTS
NAVNLTDGLD SLAGWNLTLA FAAYGVITFL NGEFINLMAF CFTLVGACAA FLWYNAHPAQ
VFMGDLGSLS LGAVLGVIAL QSQQWLLLPV VGLVFVAEAL SVILQVGYFK WTKRRTGVGR
RIFKMSPLHN HFELLGWSET QVMQRFVLVG MVAALVGISL ALTINEAQRA RMTVERPAIT
VER