Gene Rcas_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1088 
Symbol 
ID5538554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1410592 
End bp1411836 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content60% 
IMG OID640893222 
Productcell division protein FtsA 
Protein accessionYP_001431205 
Protein GI156741076 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0849] Actin-like ATPase involved in cell division 
TIGRFAM ID[TIGR01174] cell division protein FtsA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.514713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACC GCACGATTGT TGGCATCGAC GTTGGCACAA CCAAAGTCTG CACCATTGTC 
GGACAGGTGT ACGACAATGG GCGCATCAAC GTGCTTGGCG TCGGTCTGAC GCCATCCAAG
GGACTGGATA AGGGGGTGGT CGTCAATATT GACGATGCCG TCAATGCGAT TGCAACCAGC
ATCGAGAAAG CCGAACGGCT ATCCGGCTAT CGGATCAGTG CTGCATTCGT GGGTATTGCC
GGTCGGCACA TCCAGTCGCT CAACAGTCGT GGCGTTGTCG CAGTGGCGCG CAGCGATCAC
GAAATCACCC GCCATGATGT GGCGCGCGCG GTCGAGGCGG CGCAGGCGGT CGCCATTCCA
ACGCAACGCG AGGTGATCCA TGTCATCCCG CGCGCCTACG TCGTGGATGG CAACGAAGGC
ATTCGCGATC CGATCGGCAT GTCTGGTTTT CGCCTCGAAG TGGAAACGCA CATCATCACC
GGCGAGATCA TGGCGATCCA GAACCTGATC AAGAGTGTGC AGAAAACCGG CGTCGAGATT
GATGACCTGG TATTGCAACC GCTGGCGGCC GGCGAAGCGG TGCTCAGCGC CGACGATAAG
GATCGCGGTG TAGTGCTGGT GGATATCGGC GGCGGCACAA CCGACATTGC AGTCTTTGCG
CAGGGCGGTA TCTGGCACAC CAGTGTCATT CCCGTTGGCG GCAACCATTT CACCAACGAT
ATCGTGATTG TTCAACAGAC GCCTCACAAC ACTGCCGAGT ATCTGAAACT GAAGTATGGC
GCGGCGATCG CCGAAGAAAC GGAGGAACCG GATGTGATCG AAGCCGAAGG ATTTGCGCCG
GGCGAGCGAC AGCAGATCAG CCGCCATATG CTGAACCAGG TGCTGCAAGC GCGCGCCGAA
GAATTGACAG AACTGATCTA CAACGAAATC CGGCGCAGCG GCTATGAAGG TCTCCTCCCG
GCCGGCATCG TCCTGACCGG CGGCACTGCG CAGTTGCCGC GCCTCGATGA GTTGATGCGC
GACATGCTCG GCATTCCGGT GCGGATTGGC GCACCCACCG ATCTCACGGG GCTGGCGGAT
ACGCTCAACA GCCCCGCGTA TGCAACCGCA ATCGGGTTGC TGCGCTGGGG TATGCGCCAC
GGAATGAGCG GTTTCCATTC CGGCGGCGGA CCGCCGCCAG ATCACGGCGG TTGGGTCTCG
ACCTACGAAC GATTCAAACG ATGGCTGAAA GAGTTTCTGC CATAA
 
Protein sequence
MAHRTIVGID VGTTKVCTIV GQVYDNGRIN VLGVGLTPSK GLDKGVVVNI DDAVNAIATS 
IEKAERLSGY RISAAFVGIA GRHIQSLNSR GVVAVARSDH EITRHDVARA VEAAQAVAIP
TQREVIHVIP RAYVVDGNEG IRDPIGMSGF RLEVETHIIT GEIMAIQNLI KSVQKTGVEI
DDLVLQPLAA GEAVLSADDK DRGVVLVDIG GGTTDIAVFA QGGIWHTSVI PVGGNHFTND
IVIVQQTPHN TAEYLKLKYG AAIAEETEEP DVIEAEGFAP GERQQISRHM LNQVLQARAE
ELTELIYNEI RRSGYEGLLP AGIVLTGGTA QLPRLDELMR DMLGIPVRIG APTDLTGLAD
TLNSPAYATA IGLLRWGMRH GMSGFHSGGG PPPDHGGWVS TYERFKRWLK EFLP