| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1077 |
|---|
| Symbol | |
|---|
| ID | 5538543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1396095 |
|---|
| End bp | 1396355 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640893212 |
|---|
| Product | transglycosylase-associated protein |
|---|
| Protein accession | YP_001431195 |
|---|
| Protein GI | 156741066 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2261] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCCA TTTCCTGGAT TATTTTCGGC GCACTGGCCG GATGGGTTGC AAGCCTGCTC
GTCGGCATCG AGGAACGCCA GGGATGCCTG ATGAATATCA TCATCGGCAT CCTGGGCGCA
TTCGTTGGCG GACTGATTAT GGATCTGCTG GGATTCGGCG GAACGAATTT CGGATGGGAT
GTGCGCAGTT TTGGCGTGGC AGTGCTGGGA GCGATCGTTC TGCTCGCCAT CACCGGACAG
ATTCGGCAGC GCCGGCGTTA A
|
|---|
| Protein sequence | MGPISWIIFG ALAGWVASLL VGIEERQGCL MNIIIGILGA FVGGLIMDLL GFGGTNFGWD
VRSFGVAVLG AIVLLAITGQ IRQRRR
|
|---|
| |