Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1061 |
Symbol | |
ID | 5538527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1377837 |
End bp | 1378829 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893197 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001431180 |
Protein GI | 156741051 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCCC ATAGCGATGT TCTCCTCGAA GTTCGAGGGT TGAAGACCTA CTTTTATACT GAAGCCGGTG TCGTGCGCGC GGTCGATGGT ATCGATCTGA AGGTGCGTCG CGGTGAGGCG CTTGGTATCG TCGGCGAAAG CGGGTGTGGC AAGAGCGTGA CGTCGCTCTC GATCATGCGC CTGATCCAGG ACCCTCCCGG ACGAATCGTC GAGGGTGAGA TTATTTTCGA TGGCATGAAT ATTCGCTCGC TCAGCGACGA GGAGATGCGT CATATTCGCG GTAATCGCGT CTCGATGATT TTCCAGCAAC CAACCACGTG TCTCAATCCG GTGTTTAAGG TCGGTGATCA GATCATCGAG GCGCTCGAGA TTCATCAGGG GTTGCGCGGC GAAGAGGCGC GCAGACGCGC GGTTGAACTC TTGTCGCTCG TCGGTCTTCC CGACCCGGAA CGGCGCATCA ATCAGTATCC GCACGAATTG TCGGGTGGGC AGGCGCAGCG TGTGATGATT GCCATGGCGC TGGCATGCAA TCCCGAACTC CTGATCGCCG ATGAGCCGAC GACGGCGCTC GATGTGACGA TTCAGGCGCA GATTCTTGAC CTCATGCGCG AATTGCGCGA AAAGATCAAT ACGGCGATCA TTCTGATCAC CCACGATATG GGGGTGGTCG CCGAAATGGT CGATACCGTC GCAGTGATGT ACGCCGGGCA GGTCGTCGAG TATGCCGATG TGCGCAGTAT CTTCGCCGAG CCGAAGCATC CCTACACCCA GGGGTTGCTG GCGTCGATCC CGGTCCTTGG CGAAATCGTC GATGAACTGG CGACCATTCC CGGTACGGTG CCAAGCCTGA TCAATCCGCC AACCGGGTGT CGCTTCGCCG ACCGCTGCGC ACAGCGGTTT GCGCGCTGTG ATGAGCCGCC GCCGATGTTC ACCCTGAACG GTGGGCGGCA GGTGCGCTGC TGGCTGTATG CGCCCGATGC GCAACCTGCT TGA
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Protein sequence | MAAHSDVLLE VRGLKTYFYT EAGVVRAVDG IDLKVRRGEA LGIVGESGCG KSVTSLSIMR LIQDPPGRIV EGEIIFDGMN IRSLSDEEMR HIRGNRVSMI FQQPTTCLNP VFKVGDQIIE ALEIHQGLRG EEARRRAVEL LSLVGLPDPE RRINQYPHEL SGGQAQRVMI AMALACNPEL LIADEPTTAL DVTIQAQILD LMRELREKIN TAIILITHDM GVVAEMVDTV AVMYAGQVVE YADVRSIFAE PKHPYTQGLL ASIPVLGEIV DELATIPGTV PSLINPPTGC RFADRCAQRF ARCDEPPPMF TLNGGRQVRC WLYAPDAQPA
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