Gene Rcas_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1056 
Symbol 
ID5538522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1370451 
End bp1370768 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content55% 
IMG OID640893192 
Producthypothetical protein 
Protein accessionYP_001431175 
Protein GI156741046 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4118] Antitoxin of toxin-antitoxin stability system 
TIGRFAM ID[TIGR01552] prevent-host-death family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.809655 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.691667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTGCCTCG CCATCCCATG GTTTCCGCTA CGAATGTACA CCATGAGATG CTGGCTGAGT 
ATCCAAAGCA GAAGGCAGGG AATGCTCGAA GTCAACATCA AAGAACTGCG GAAACAACTG
GCAGAATATA TTGCGCGCGT GGAGGCGGGT GAAGAAATCA TCGTCATCCG GCAGGAAAAA
GCTGTGGCGC GGTTGATGCC GCCAGTGCGC CCATGTCCTC AATTCCCCGC TCTGACTGAG
TTTCGCGCCA GCATTGCGCT GCGAGGCGAA GGCTTGAGCG AAACGGTCAT TACTGAGCGT
CGGAAAGCGC GCTACTAA
 
Protein sequence
MCLAIPWFPL RMYTMRCWLS IQSRRQGMLE VNIKELRKQL AEYIARVEAG EEIIVIRQEK 
AVARLMPPVR PCPQFPALTE FRASIALRGE GLSETVITER RKARY