Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1027 |
Symbol | |
ID | 5538493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1339704 |
End bp | 1341098 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893166 |
Product | hypothetical protein |
Protein accession | YP_001431149 |
Protein GI | 156741020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCATA TGCGACTGTT CGTTCTTCTC GTCATCCTGA CACCTTTCGC ACTCTCATCA TCCCCCGTTG TCGAGTCGGA GGAAATGACG TTTGCCGCCT ATCTGCCGCT GATCAATGTC CCCGACACAC GAGTGCTCTG GGGGTACGAT CTGCGGGTAT CGCGCGGAGC GCAGGCTGAA TCGCTGTTGC CGACGCTCCC TGCAACCTGG GCGCGCGCCG GCGATCTGGT GTGGGGTGCA ATCGAAACGC AGCGCGGCGT CTATGACTGG GAAGCGGCAG CCGGGTTAGA AGCCAACATC CGCCGGTTGC GCGCCGCCGG TGTCGAGCCG ATTGTCCTGG TGCAGAGCGC CCCCGCATGG GCGCGGCGTT TGCCGGATCG CGCGTGCAGC CCGGTTGCGC CCGAAGCCTA TGCAGACCTG GCGCGGTTTG CCGCTGCGGT GGCGGCGCGC TACCGCAGCG GCGATCTTGC CGTGCGGTAC TGGCAATTCT GGAATGAGCC GGATTTCACA CCCGCAGTCG CCGATACCAA AGGCATCGGG TGTTGGAACA CCGGTGTTGC GCCGTGGTAT GGCGGCGATG CCTATGGCGC CGCGCTTCGT GTGTTCGCAA ACGCGGTGCG CTCGGTCGTC CCTGGGGCGC AGATCATTGG CGGCAATTTT GCCCATTTCT GGCCCGACGA CCGGCAGACG CTCGGTTTTC TGCGCGGTAT GATTGAAGGG GGCGGTCTGG CATGTGACAT GATCGGCTTC TCCGGTTACA CACGCTGGGG CAGCGCCGAG CGCATGACCT TGAAAGCGCA GAGTCTGCGC CGGACATTGG CGGCATATGG TCTCGCATGG ATGCCGCTCG CCGCCGTGGA GGTCGCCGAC GTCTGCCCCG AAGGGCAGCC TTGCCCTCCT GATTTCCATC AGGCGCAGGC AAACTACGCC GCCCGTATTT ACGCTCTTGC AATTGCACTG AACCTGCGCG GCATTCTCTG GTATACCTTG CTGGAGCAGG GAGCGGGGTT CCAGCACAGT CACCTGGCGG ACGTTGGGAG TAGCGGGGTG ACGCCACGAC CGGCGTTCTA TGCCTATCGC AACGCAGCGT TGCTGCTCCA GGGTGCAGCG TATGCCGGTC CGCCATTGAA CGATGTGCGT TTCGATCAGG AAGGCGTACC GCATATGCTC CGCTTTATTG CCCGCGATGG CGCACCATTG TACGTCTTCT GGCGTCCCAC TGCGCAGGAC GAGGCGGGGT GGGGGCTTGT CACATCTTCT GGGCGGCGGG CGACCTGCAT TTCGCATCTC GAACGCCCAA CACCCCTTGC CGTCGATTGC TCTGATCAGG ACGGGGACGG ACTGATCCGA TTCACAGTCA GCGATGCACC AATCTACATC CGTCTGGCGC CGTAG
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Protein sequence | MGHMRLFVLL VILTPFALSS SPVVESEEMT FAAYLPLINV PDTRVLWGYD LRVSRGAQAE SLLPTLPATW ARAGDLVWGA IETQRGVYDW EAAAGLEANI RRLRAAGVEP IVLVQSAPAW ARRLPDRACS PVAPEAYADL ARFAAAVAAR YRSGDLAVRY WQFWNEPDFT PAVADTKGIG CWNTGVAPWY GGDAYGAALR VFANAVRSVV PGAQIIGGNF AHFWPDDRQT LGFLRGMIEG GGLACDMIGF SGYTRWGSAE RMTLKAQSLR RTLAAYGLAW MPLAAVEVAD VCPEGQPCPP DFHQAQANYA ARIYALAIAL NLRGILWYTL LEQGAGFQHS HLADVGSSGV TPRPAFYAYR NAALLLQGAA YAGPPLNDVR FDQEGVPHML RFIARDGAPL YVFWRPTAQD EAGWGLVTSS GRRATCISHL ERPTPLAVDC SDQDGDGLIR FTVSDAPIYI RLAP
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