| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1005 |
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| Symbol | |
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| ID | 5538471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1315364 |
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| End bp | 1316233 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893148 |
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| Product | nicotinate-nucleotide pyrophosphorylase |
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| Protein accession | YP_001431131 |
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| Protein GI | 156741002 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0157] Nicotinate-nucleotide pyrophosphorylase |
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| TIGRFAM ID | [TIGR00078] nicotinate-nucleotide pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.257167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTAA ACTCTTCACT CCACCCGGAT ATTCTCGACG CCATCCGCCG CGCACTCACA
GAGGACGTCG GACCGGGGGA TGTCACCACC AACAGCATCG TGCCGCCGGA TGCGGCGATG
CGCGGACGGA TCATCGCCAA ACAGGACGGC GTGGTGGCCG GGCTTGATGT GGCGCAGGCG
GTGTATCGCG CCGTCGATGA GCGGATCGTC TTCACGGCGC TGGTCGCGGA AGGCGAGCGC
GTCACTAATC GACAGCCCCT CGCGCTTGTT AGCGGTCCGG CGCGCGGGTT GCTCACCGCA
GAGCGCGCGG CGCTCAATTT TCTGGGGCGA ATGTCGGGTA TTGCCACGCT AACCCGCCGG
TTTGTGGACG CCGTCGCCGG GACAGGCGCG ACCATTCTCG ATACGCGCAA AACCGCCCCC
GGATTGCGCA TGGTCGATAA ACTCGCTGTT CGGCGCGGCG GCGGGCGCAA CCATCGCATC
GGGTTGTACG ACATGGTGTT GATCAAGGAC AACCATATCG ACTTTGCCGG TTCGCTGCGC
GCTGCGGTCG AACGCGCCCG CGCACACGCG CCGCACCTGG AGATTGAGGT CGAGGCGCGC
ACCCTCGATG ACGTGCGTGA GGCGCTCGAT CTTGGGGTGC AGCGCATCAT GCTCGATAAC
ATGCCCCCCG CGATGATGGC GGAAGCGGTG CGCCTGGTCG CCGGTCGCGC TCGCCTCGAA
GCGTCGGGGA ATGTGTCGCT CGACAATGTC CGACAGATTG CCGAAACCGG GGTGGACGAC
ATTTCCATCG GCGCTCTGAC CCACTCGGCG CGCGTTTTTG ATGTCAGTTT CGATTATCTT
GCTTCGGAAG AAGCCACAGG GAGACCATGA
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| Protein sequence | MTLNSSLHPD ILDAIRRALT EDVGPGDVTT NSIVPPDAAM RGRIIAKQDG VVAGLDVAQA
VYRAVDERIV FTALVAEGER VTNRQPLALV SGPARGLLTA ERAALNFLGR MSGIATLTRR
FVDAVAGTGA TILDTRKTAP GLRMVDKLAV RRGGGRNHRI GLYDMVLIKD NHIDFAGSLR
AAVERARAHA PHLEIEVEAR TLDDVREALD LGVQRIMLDN MPPAMMAEAV RLVAGRARLE
ASGNVSLDNV RQIAETGVDD ISIGALTHSA RVFDVSFDYL ASEEATGRP
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