Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1001 |
Symbol | |
ID | 5538467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1310118 |
End bp | 1310993 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640893144 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001431127 |
Protein GI | 156740998 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.11991 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCACG ATTTTCAATC CATGCGCATC CCAACCCGGG ACGCCGAGAT TCATCTGGTG CGCGGCGGGT CTGGTCCGCC GCTGTTGCTG CTTCACGGCT ACCCGCAGAC CCATCTGATG TGGCGGAAGG TTGCGCCGCG GCTGGCTGCC GATTTCACCG TCATCGCAGC AGACCTGCGG GGCTATGGCG ATAGCAGCAA GCCCCCCGGC GGCGCGGATC ACGCAGCGTA CAGCAAACGC GCTATGGCGC AGGATATGGT TGAAGTGATG GATGCGCTCG GCTTCTCACG CTTCATGGTC GCCGGTCACG ACCGCGGCGC GCGCGTCGTC CATCGCCTCT GCCGCGATCA CCCCGATGTC GTGATCCGCG CTGCGGTGCT CGACATTGCA CCCACGCTCT TCATGTATAC CACTGCCGAC CGCGCGTTCG CCGAAGCCTA CTACCACTGG TTCTTCCTGA TTCAGCCCTA CGACCTGCCA GAACGACTGA TCGGCGCCGA CCCGAAGTAC TACCTGCGCA AAAAACTTGC CCACTGGGGA CGCACGCCCT CCGCCTTCGA GCCAGACGTG TTCGCCGAAT ATGTGCGCTG CTTCAGCGAT CCGGCGACGA TCCACGCGAC CTGCGAAGAT TATCGAGCGG CGGCGAGCAT CGATTTGCGC CACGATGAAG CCGACTTGCA TGTGCCGATT GCCTGCCCGC TGCTGGCGCT CTGGGGAGCA GAGGGGTTCA TTGGGAGACG ATACGATGTG CTGGCGGTCT GGCGGCAGCA CGCAGTCGAT GTGCGCGGGC ACGCTGTGCC TGGCGGGCAC TATCTCCCCG AAGAAGCGCC GGAAGAAACG TATGCCGCGC TACGGACATT TTTCGCTGAG ACGTAG
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Protein sequence | MFHDFQSMRI PTRDAEIHLV RGGSGPPLLL LHGYPQTHLM WRKVAPRLAA DFTVIAADLR GYGDSSKPPG GADHAAYSKR AMAQDMVEVM DALGFSRFMV AGHDRGARVV HRLCRDHPDV VIRAAVLDIA PTLFMYTTAD RAFAEAYYHW FFLIQPYDLP ERLIGADPKY YLRKKLAHWG RTPSAFEPDV FAEYVRCFSD PATIHATCED YRAAASIDLR HDEADLHVPI ACPLLALWGA EGFIGRRYDV LAVWRQHAVD VRGHAVPGGH YLPEEAPEET YAALRTFFAE T
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